Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4793 |
Symbol | |
ID | 5197955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 5278234 |
End bp | 5280852 |
Gene Length | 2619 bp |
Protein Length | 872 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640584350 |
Product | hypothetical protein |
Protein accession | YP_001265268 |
Protein GI | 148557686 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0448007 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.10998 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATAATC CGCCCCTCCG CCGCCTGATC GCCCGCCTGC GCGAACGGCG CGGGCCGCTG TCGGTCGTCC TCGTCATGCT GCTGATCGGG ATCGGTTTCG CCGCGCTCCA CCAACTCACC CAGACGCTGC GGTTGCAGGA CATATTGGCG GCGTTCGACG CGATCGGCTC CCGCCAGGTG GCGCTCGCGA TCGGCTGCAC CGTCGCCAGC TATGTCGCGC TGACCTTCTA CGACCTGCTC GCGCTGCGCG TCATCGGCCG GCCGCTGCCC TGGCGGACCG CCGCGCTCGC GTCCTTCACC AGCTACACGA TCAGCCACAA TCTCGGCCTC GCGCTGATCA CCGGCGGATC GGCGCGCTAC CGCATCTACA CCGCCGCCGG CCTGTCGGGC GGCGACGTGG CGCGGATCGT CGCGATCGCC TCGGCGACCT TCTGGATGGG GGTGCTGGCG ATCACCGGCC TCGCCCTCGC CTTCCACCAG GGCGGACTGT CGCTGGCGGG GGTCGCGCTG GGCGGGACCG CCGCGCGCGT CGCCGGCGGC GCGATCCTCG CCGGGGCGGC CGGCTTCGTC CTCGCCTGCG CCTTCGGCCC GCGCGAGATC CGGCTGTTCG GCTGGACGCT GCCATTGCCG GGCGCGGGCG TCGCGCTCGG CCAGATCGCG ATCGCGGGGA TCGACCTCGC CGCCGCCTCG GCGGCGCTGT TCGTCCTGAT CCCCGGCGCC GATCCGGCGC TGCTCCCCGC CTTCCTCCTC GCCTATGCGC TCGGCATCAT CGCCGCGCTG GTCAGCCATG TCCCCGGCGG CATCGGCGTG TTCGAGGCGG TGGTGCTGGC GACCGTCCCG GCCGACCGGC CCGCGCTCGC CGCCGCGCTG ATCGCCTATC GGCTGATCTA TTATCTGCTG CCGCTGGCGC TCGGCATCGT CGCGCTGGTG CTGCACGAGG GCCGCCAGCG CCGCCTCGGC CGCGCGATCG CGGGGGTGCG GCTGGTCGCC AACGGCCTCG CCCCGCTGCT GATGGGCGTG GCGAGCTTCC TCGGCGGCGC GGTGCTGCTG CTGTCGGGAT CGACCCCTGC CGTTCCCGCC CGCCTGCACA CGCTGCACGC GATCGTGCCG CTGCCCTTCA TCGAGGCGTC GCACCTCGCC GCCAGCCTGG TCGGCACCGG GCTGCTGCTG CTCGCGCCCG GCCTCTACCG CCGCCTCGAC GGCGCCTTCG TCGCCGCCCG CGCGCTGCTG ATCGCCGGGG CGATCTTCTC GCTGGCCAAG GGCATCGACT ATGAGGAGGC GATCGTCTGC CTGACGATCG CGGCGCTGCT GCAATGGACC AGCCCGGCCT TCTACCGGAC CACGGCCTTC GTCGCGCGCG CCTTCTCGCT CGCCTGGCTG GTCTGCGTCG CGGCGGTCGG CGGCCTCAGC CTGTGGGTCG GCCTCTTCTC CTACAAGCAT GTCGCCTATC AGAACGCCCT GTGGTGGGAC TTCGCGCTGC ACGGCGACGC GTCGCGCTAC CTGCGCGCCA GCCTCGGCAC AGCCGTGCTG CTCGCCGGGG TGGCGCTGGG GCGGCTGTTC GCGCCGGCCG CGCCCCGCCG CGACCAGACG GCGCTGCCGG CCGAGGTCGC CGACGTGATC GAGGGCGCCG AGCGCACCGA TGCGATGCTC GCCTATACCG GCGACAAGCG CTTCCTCTTC TCCCCCGACG GCGACGCCTT CCTGATGTAC CAGATCCGCG GATCGAGCTG GATCATGATG GCCGATCCGG TCGGCCCGCG CGCCGCCTGG GCCGGCCTGC TCTGGACGAT CCGTTCGATG GCGGACGCCG CGCAGGGCCG GCTGATGCTC TACCAGATCA GCAGCGACAT GCTCGAACTG GCGATCGCGC TGGGCCTGCA GATCGTCAAA TATGGCGAGG AGGCGATCGT CGACCTCGCC GCTTTCTCGA TCGAGGGGCC GCGGATGCGC TCGATCCGCC AGACGGTTCG CCGCGCCGAG CGCGAGGGCG CGACCTTCGA AGTCGTCCCC GCCGCCGAGG TCGCCGCGAT CATCCCCGAC CTTGCCGCCA TCTCCGACGA ATGGCTGGAG GCGAAGGGCC AGCGCGAGAA GGGCTTCAGC CTGGGCCGCT TCGATCCCGA CTATGTCGCG CGCTTCGATT GCGCGCTGGT CCGGGTCGAG GGACGGATCG TCGCCTTCGC CAATATCTGG CGGACGCCCA ACGGACGCGA GCTGTCGGTC GACCTGATGC GCCATGGCGC GGGATCGCCG CCGGGGGTGA TGGACTATCT GTTCGCCAGC CTGATGCTGT GGGGCCGGGA GAACGGCCAT GCCCGCTTCT CGCTGGGCCT CGCCCCGCTG TCGGGGATCG AGGCGCACCG GCTGTCGCCG CTCTGGGTGA AGGCCGCCGC TGCGATCTTC AAGCGCGGCG AGCGCTTCTA CGGCTTCCGG GGCCTGCGCG CCTACAAGGA GAAATTCGCG CCGGTCTGGG AACCGCGCTA CATTGCAGCG CCGCATGGCC TCGGCCTCGT CCGGGCGATG CGCGACCTCA ACCAGCTGAT CGGCCGCCCG CATCCGGTGT CCGATCGCGC CGCCTCCCCG GCGGCGGCCG ATGCCGACCC GCCCCGCCTC GCCGCCTGA
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Protein sequence | MHNPPLRRLI ARLRERRGPL SVVLVMLLIG IGFAALHQLT QTLRLQDILA AFDAIGSRQV ALAIGCTVAS YVALTFYDLL ALRVIGRPLP WRTAALASFT SYTISHNLGL ALITGGSARY RIYTAAGLSG GDVARIVAIA SATFWMGVLA ITGLALAFHQ GGLSLAGVAL GGTAARVAGG AILAGAAGFV LACAFGPREI RLFGWTLPLP GAGVALGQIA IAGIDLAAAS AALFVLIPGA DPALLPAFLL AYALGIIAAL VSHVPGGIGV FEAVVLATVP ADRPALAAAL IAYRLIYYLL PLALGIVALV LHEGRQRRLG RAIAGVRLVA NGLAPLLMGV ASFLGGAVLL LSGSTPAVPA RLHTLHAIVP LPFIEASHLA ASLVGTGLLL LAPGLYRRLD GAFVAARALL IAGAIFSLAK GIDYEEAIVC LTIAALLQWT SPAFYRTTAF VARAFSLAWL VCVAAVGGLS LWVGLFSYKH VAYQNALWWD FALHGDASRY LRASLGTAVL LAGVALGRLF APAAPRRDQT ALPAEVADVI EGAERTDAML AYTGDKRFLF SPDGDAFLMY QIRGSSWIMM ADPVGPRAAW AGLLWTIRSM ADAAQGRLML YQISSDMLEL AIALGLQIVK YGEEAIVDLA AFSIEGPRMR SIRQTVRRAE REGATFEVVP AAEVAAIIPD LAAISDEWLE AKGQREKGFS LGRFDPDYVA RFDCALVRVE GRIVAFANIW RTPNGRELSV DLMRHGAGSP PGVMDYLFAS LMLWGRENGH ARFSLGLAPL SGIEAHRLSP LWVKAAAAIF KRGERFYGFR GLRAYKEKFA PVWEPRYIAA PHGLGLVRAM RDLNQLIGRP HPVSDRAASP AAADADPPRL AA
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