| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4787 |
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| Symbol | |
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| ID | 5199330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5269891 |
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| End bp | 5272518 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640584344 |
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| Product | aconitate hydratase |
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| Protein accession | YP_001265262 |
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| Protein GI | 148557680 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1
[TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0629785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0288471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCCC AGATCTTCCG CAAGAAGCTG CCGGGCACGG CCGTCGACTA TCATGACGCG
CGCGCGGCGA TCGACGCCAT CCGGCCGGGC GCCTATGACG GGCTACCCTA TGTCTCCCGC
GTGCTGGCCG AGCAGCTCGT CCGCCGCTGC GATCCGCCGC TGCTCGAAGA CGCGCTGCGG
CAGATCGTCG AGCGGCGGCG CGATCTCGAT TTCCCCTGGT ATCCGGCGCG GGTCGTCTGC
CACGACATCC TCGGCCAGAC GGCGCTGGTC GACCTGGCCG GCCTGCGCGA CGCGATCGCC
GAGGCGGGAG GGGACCCGGC CAGGGTCAAT CCGGTGGTGC CGACGCAGCT GATCGTCGAC
CACAGCCTCG CGGTCGAGCA TGGCGGGTTC GATCCGCAAG CCTTCGCCAA GAACCGCGCG
ATCGAGGATC GCCGCAACGA GGACCGCTTC CACTTCATCG AGTGGACCCG GCGCGCCTTC
GAGAATGTCG ACGTGATCCC GGCGGGCAAC GGCATCATGC ACCAGATCAA CCTGGAGAAG
ATGTCGCCGG TGATCCAGCT CCGCGACGGC GTCGCCTTTC CCGATACCTG CGTCGGCACC
GACAGCCATA CGCCGCATGT CGGCGCGCTG GGCGTCATCG CGATCGGCGT CGGCGGGCTG
GAGGCGGAGA CGGTGATGCT CGGCCGCGCC TCGATGATGC GCCTGCCCGA CATCGTCGGC
GTCCGGCTGA CCGGTCGGCG CGCGCCGGGC ATCACTGCCA CCGACATCGT CCTCGCGCTC
ACCGCCTTCC TCCGCGAGGC GCGCGTGGTC GGCGCCTGGG TCGAGTTCTT CGGGGAAGGG
GCCGCCGCCC TGTCGATCGG CGACCGCGCG ACCATCTCCA ACATGTGCCC CGAATATGGC
GCGACCGCCG CGATGTTCCA TATCGACGGG CAGACGATCG ACTATCTCCG GCTCACCGGC
CGCGCCCCCG AGCAGGTCGC GCTGGTCGAG ACCTATGCGA AAGCCGCGGG CCTCTGGGCC
GACGCGCTGG AGACCGCCGA ATATGAGCGC GAGCTGGCGT TCGACCTGTC GAGTGTCGGC
CGCACCATGG CCGGCCCGTC CAACCCGCAC CGTCGCCTGC CGACCAGCGC CCTGAAGGAA
CGCGGCATCG CGACCGGCCT GGTCGAGGCG CAGGCCGAAG AGCGCGCGGG GCTGCTCCCC
GACGGCGCGG TGATCATCGC CGCGATCACG AGCTGCACCA ACACGTCGAA CCCGCGCAAC
GTGGTCGCGG CCGGGCTGCT GGCGAAGAAG GCCAATGTGC TCGGGCTGGG GCGCAAGCCG
TGGGTCAAGA CCTCGTTCGC GCCGGGCTCG CGCGTCGCGC GGCTCTATCT GGAGGAGGCC
GGGCTGCTGC CCGAGCTGGA GGCGCTCGGC TTCGGCATCG TCGGCTATGC CTGCACCACC
TGCAACGGCA TGTCCGGCGC GCTCGATCCG GCGATCCGGC AGGAGATCGT CGATCGCGAC
CTCCATGCCG TCGCCGTGCT CTCGGGGAAC CGCAATTTCG ACGGGCGCAT CCATCCCCAT
GCCCGGCAGG CCTTCCTCGC CTCGCCGCCG CTGGTCGTCG CCTATGCGAT CGCCGGCACG
ATTCGCTTCG ACATCGAGCA GGACGTGCTC GGCGTCGTCG ACGGCCGGGA CATCCGGCTC
AAGGACCTGT GGCCGTCCGA CGAGGAGATC GACGCGATCG TCGCCGCCAG CGTGAAGCCC
GAGCAGTTCC GCCGGGTCTA TGAGCCGATG TTCGCGACGC GCAGCGATGC GGCGGAAGCG
ACCCCTCCGC TTTACGACTG GCGCCCCCGG TCGACCTATA TCCGCCGTCC GCCCTATTGG
GACACCGAGG GCATCGGCGC GCTGGCGGCC AGCCCGCGCA GCCTGACGGG GATGCGGCCG
CTGGCGATCC TGCCGGACAA TGTCACCACC GATCATCTGT CGCCGTCGAA CGCCATCCTC
GCCAACTCGG CCGCCGGCGA ATATCTGGCG AGGATGGGTT TGCCGGAAGA GGACTTCAAC
AGCTACGCCA CCCATCGCGG CGACCATCTC ACCGCGATGC GCGCGACCTT CGCCAATCCG
CAACTCGTCA ACGAGATGGC GGTCGTCGAC GGCGAGGTGT GGAAGGGATC GCTGGCCCGC
GTCGAACCCG ACGGCACGGT GATGCGCATG TGGGAGGCGA TCGAGACCTA TATCGGGCGC
CGGCAGCCGC TGATCATCAT CGCCGGCGCC GACTATGGCC AGGGTTCCTC GCGCGACTGG
GCGGCGAAGG GCGTCCGGCT GGCGGGCGTC GAGGCGATCG TCGCCGAAGG GTTCGAGCGC
ATCCATCGCA CCAACCTGAT CGGCATGGGG GTGCTGCCGC TCGAATTCCG GCCGGGCACG
ACGCGGCTGA CACTGGGGCT CGACGGCACC GAGACCTATG ACGTGATCGG CCGGCGCATA
CCCGGCGCCG GGCTGACTCT GCTGGTCCGT CGCAGCGGCG GCGAGGCGAT CGAGGTGCCG
GTCGTCTGTC GCCTCGACAC CGCCGAGGAG GCGTCGATCT ACGAAGCCGG CGGCGTGCTC
CAGCGCTTCG CCCAGGATTT CCTCGCCGCC GGGGTGGAGG CCGCCTGA
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| Protein sequence | MFSQIFRKKL PGTAVDYHDA RAAIDAIRPG AYDGLPYVSR VLAEQLVRRC DPPLLEDALR
QIVERRRDLD FPWYPARVVC HDILGQTALV DLAGLRDAIA EAGGDPARVN PVVPTQLIVD
HSLAVEHGGF DPQAFAKNRA IEDRRNEDRF HFIEWTRRAF ENVDVIPAGN GIMHQINLEK
MSPVIQLRDG VAFPDTCVGT DSHTPHVGAL GVIAIGVGGL EAETVMLGRA SMMRLPDIVG
VRLTGRRAPG ITATDIVLAL TAFLREARVV GAWVEFFGEG AAALSIGDRA TISNMCPEYG
ATAAMFHIDG QTIDYLRLTG RAPEQVALVE TYAKAAGLWA DALETAEYER ELAFDLSSVG
RTMAGPSNPH RRLPTSALKE RGIATGLVEA QAEERAGLLP DGAVIIAAIT SCTNTSNPRN
VVAAGLLAKK ANVLGLGRKP WVKTSFAPGS RVARLYLEEA GLLPELEALG FGIVGYACTT
CNGMSGALDP AIRQEIVDRD LHAVAVLSGN RNFDGRIHPH ARQAFLASPP LVVAYAIAGT
IRFDIEQDVL GVVDGRDIRL KDLWPSDEEI DAIVAASVKP EQFRRVYEPM FATRSDAAEA
TPPLYDWRPR STYIRRPPYW DTEGIGALAA SPRSLTGMRP LAILPDNVTT DHLSPSNAIL
ANSAAGEYLA RMGLPEEDFN SYATHRGDHL TAMRATFANP QLVNEMAVVD GEVWKGSLAR
VEPDGTVMRM WEAIETYIGR RQPLIIIAGA DYGQGSSRDW AAKGVRLAGV EAIVAEGFER
IHRTNLIGMG VLPLEFRPGT TRLTLGLDGT ETYDVIGRRI PGAGLTLLVR RSGGEAIEVP
VVCRLDTAEE ASIYEAGGVL QRFAQDFLAA GVEAA
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