| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4786 |
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| Symbol | |
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| ID | 5199329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 5266907 |
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| End bp | 5269228 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640584343 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
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| Protein accession | YP_001265261 |
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| Protein GI | 148557679 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00168463 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0567025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTCA CTGCCGCCAA TCTCGGCTTT CCCCGCATCG GCCCGCGCCG CGAACTGAAG
ACCGCCGTCG AGGCCTATTG GGCCGGCAAG GCCGACGAGG CCCAGCTCCT CGACACCGCC
CGGCGCCTGC GCGCCGCGAC CTGGGACCGC CAGAAGGCGG CCGGCATCGC GGTGATCCCG
AGCAACGACT TCTCGCTCTA CGACCAGGTG CTCGACACCA GCGTCATGGT CGGCGCGATC
CCCGACATCT ATCGCGGCCT CGGCGCGCCG GACTCGCTCG CCGTCTATTT CGCGATGGCG
CGCGGCACCC GCACCGCCGA CGACGACGCG GGCTGCGCCC ACGGCCATGG CAAGGGCGGC
GACGTGCCCG CCCAGGAAAT GACCAAATGG TTCGACACCA ACTATCATTA CATGGTGCCC
GAGGTGTCGC CGGACCAGGG CTTCGCGCTC GCTACCGCCA AGCCGGTCGA TCATTTCAGG
GAAGCGAGGG CGCTCGGCCA TCACACCCGG CCGGTGATCC TCGGCCCGGT CACCTGGCTG
CTGCTGGCCA AGTCGAAGGC CGAGGGCTTC GATCCGCTGT CGCTGCTGCC CCGGCTGCTG
CCGGTCTATG CCGATCTGCT CGGCCGGCTG CGCGACGCCG GCGCGGACTG GGTGCAGATC
GACGAGCCGG CGCTGGTGCT CGACCTGAGC GACGCGGCCC GCGCCGCCTA TGTCTCGGCC
TATGGCGAGC TGGCGAAGGT CGACGGCATC AAGCTGATGC TCGCCACCTA TTTCGGCGCG
CTGGGCGACA ATCTGAAAAC CGCCCTGTCG CTCCCCGTCG CCGGCCTGCA CGTCGATCTC
GTCCGCGCGC CCGAGCAGCT CGACGCCGTG CTGGCCGGGG CCCGCAAGGA CCTCCTGCTC
TCGCTCGGCC TGATCGACGG CCGCAACATC TGGAAGGCCG ACCTCACCGC CCTGCTCGAT
CGCTACGAGC CGATCATGAA GTCGCGGTCG GCGTTCCAGA TCGCCCCGTC CTGCTCGCTG
CTGCACACGC CGATCGACCT GGCGCTGGAG ACGAAGCTCG ATCCGCAGGT GAAGGACTGG
CTCGCCTTCG CCGCGCAGAA GCTCGAGGAG CTTTCGCTAC TGGGCCTCGG CCTGTCGAAC
GGCCGCTACG TGATCTCGGA CGAGCTGCTC GCCAATGCGG ACTCGATCCA GGGCCGCCGC
AATTCGCCGC TGACCAACGA TCGCAAGGTC CGTGACCGAG CGGCGCGGAT CACCGGCGAC
TGGGCCCGGC GCAAGGCCCC CTTCGCCGAT CGGATCAAGG CGCAGCAGGC GCGGCTGAAC
CTGCCGTTGC TCCCCACCAC GACGATCGGC TCCTTCCCGC AGACCGCCGA GGTCCGCAAG
GCGCGCTCGG CGCACGACAA GGGCGAGCTC GACACCGCCG GCTATGAACG CTTCCTGCGC
GAGGAGACGG CGCGGGCGAT CGCCTGGCAG GAGGAGATCG GCATCGACGT GCTCGTCCAT
GGCGAGTTCG AGCGCAACGA CATGGTGCAA TATTTCGGCG AGCAGCTCGC CGGCTTCGCG
TTCAGCCGCG CCGGCTGGGT GCAGAGCTAC GGCTCGCGCT GCGTCCGCCC GCCGATCATC
TACGGCGACG TGTCGCGCCC GAAGCCGATG ACGGTCGCCT GGTGGCACTA TGCCCAGTCG
GTGACGGCCA GGCCGATGAA GGGGATGCTG ACCGGCCCGG TGACGATCCT CAACTGGTCG
TTCGTCCGCG ACGACCAGAG TCGCGAGGAG ACCTGCCGCC AGATCGCGCT GGCGATCCGC
GACGAGGTGC TCGACCTCGA AGCCGCCGGC GCCCGGATCA TCCAGATCGA CGAGGCCGCG
CTGCGCGAGG GGCTGCCGCT GCGCCGCGCC GACTGGCAAC ATTATCTCGA CTGGGCGGTC
GAAAGCTTCC GCATCTCCGC CGCGGGCGTC GCCGACGAGA CCCAGATCCA TACCCATATG
TGCTATTCGG AGTTCAACGA GATCATCGAT TCGATCGGCG CGATGGATGC CGACGTCATC
TCGATCGAGA CGTCGCGGTC GAAGATGGAG CTGCTCGACG CGTTCGTCGA CTATGCCTAT
CCGAACGAGA TCGGGCCGGG CGTCTACGAC ATCCACAGTC CGCGCATCCC GACCACGCGG
GAGATGGAAG CCCTGCTGAT CAAGGCCGGC GAGCGGCTGT CGGCGCGGCA GCTCTGGGTC
AATCCCGATT GCGGCCTCAA GACCCGCAAA TGGGAGGACG TGAAGCCCGC GCTGGTCGCG
ATGGTCGACG CGGCGAAGGC GGCCCGTGCG GCTCTCGCCT GA
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| Protein sequence | MSVTAANLGF PRIGPRRELK TAVEAYWAGK ADEAQLLDTA RRLRAATWDR QKAAGIAVIP
SNDFSLYDQV LDTSVMVGAI PDIYRGLGAP DSLAVYFAMA RGTRTADDDA GCAHGHGKGG
DVPAQEMTKW FDTNYHYMVP EVSPDQGFAL ATAKPVDHFR EARALGHHTR PVILGPVTWL
LLAKSKAEGF DPLSLLPRLL PVYADLLGRL RDAGADWVQI DEPALVLDLS DAARAAYVSA
YGELAKVDGI KLMLATYFGA LGDNLKTALS LPVAGLHVDL VRAPEQLDAV LAGARKDLLL
SLGLIDGRNI WKADLTALLD RYEPIMKSRS AFQIAPSCSL LHTPIDLALE TKLDPQVKDW
LAFAAQKLEE LSLLGLGLSN GRYVISDELL ANADSIQGRR NSPLTNDRKV RDRAARITGD
WARRKAPFAD RIKAQQARLN LPLLPTTTIG SFPQTAEVRK ARSAHDKGEL DTAGYERFLR
EETARAIAWQ EEIGIDVLVH GEFERNDMVQ YFGEQLAGFA FSRAGWVQSY GSRCVRPPII
YGDVSRPKPM TVAWWHYAQS VTARPMKGML TGPVTILNWS FVRDDQSREE TCRQIALAIR
DEVLDLEAAG ARIIQIDEAA LREGLPLRRA DWQHYLDWAV ESFRISAAGV ADETQIHTHM
CYSEFNEIID SIGAMDADVI SIETSRSKME LLDAFVDYAY PNEIGPGVYD IHSPRIPTTR
EMEALLIKAG ERLSARQLWV NPDCGLKTRK WEDVKPALVA MVDAAKAARA ALA
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