Gene Swit_4785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4785 
Symbol 
ID5199328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5266489 
End bp5266923 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content72% 
IMG OID640584342 
Productdihydroneopterin aldolase 
Protein accessionYP_001265260 
Protein GI148557678 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1539] Dihydroneopterin aldolase 
TIGRFAM ID[TIGR00525] dihydroneopterin aldolase
[TIGR00526] FolB domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0888028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.076763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGCTCT CGCCTGACCG GCCGCGCCTC CCCTCCTCCG ACGACGAGGG CCTCGACCGC 
ATGTTCCTGC ATGGGGTCGA GGTCCATGGC CGGCACGGCG TGTTCGATTT CGAGCGCCGC
GCCGGCCAGC GCTTCGTCGT CGACGTCGAC TGGTGGCTCG CGACCGGCGC GGCGGTGGCG
AGCGACCGGC TCGATGCGAC GCTCTGCTAC AAGCGCCTCC ACGATCGCGT GGTCGCGATC
ATCGCCGGGG AACCCTGGTC GCTGATCGAG ACGCTCGCCG ACGCCCTCGT CCGGACGCTG
CTGACGGATT TCGCCGCGAT CGAGATCGTC CGGGTCACCG TCCACAAGCC CGACGCCCCG
ATCGGCGGCA CCTTCGCCGA CGTCGGCATC ACCATGGCCC GCCGCCGCCC GATCGACCGC
GACGGCGCGG GCTGA
 
Protein sequence
MRLSPDRPRL PSSDDEGLDR MFLHGVEVHG RHGVFDFERR AGQRFVVDVD WWLATGAAVA 
SDRLDATLCY KRLHDRVVAI IAGEPWSLIE TLADALVRTL LTDFAAIEIV RVTVHKPDAP
IGGTFADVGI TMARRRPIDR DGAG