| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4781 |
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| Symbol | |
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| ID | 5196724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 5258745 |
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| End bp | 5261006 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640584338 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001265256 |
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| Protein GI | 148557674 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.211672 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAGGA TGACCAACCA GATGCTGCGC ATGGCGAGCG GCAGCGCGAT CGCGGCCTTG
CTGGCGATCA GCGGCCAGGC ATCGGCGCAG GCCGCGGCCG AGGCTGAGAA TCAGGGGCTG
GAGGACATCG TCGTCACCGC CCAGCGGCGC AGCGAAAGCA TCCAGAACGT GCCGGTCGCG
GTGACCGCGT TCAACACGCA GGAACTGCAG CGCGCGAACA TCCAGGACGT CGGCGCCTAT
TTCCAGAACA CGCCCAACGT CTTCATCACC GACAGCCCGG TGCGCAGCGG CAACAACGTG
TCGAGCAGCG CGCTCGGCCT GGCGCTGCGC GGCATCTCGA ACGTCGGCGG CAACGCGTCG
TCGTTCGGCA TCTATCTCGA CGATTTCAAC ATCTCGAACA TCGCGCTCAA CCCGCACCTG
ATCGACATGG AGCGGATCGA GGTGCTGCGC GGGCCGCAGG GCACCTATTT CGGACGCAAC
GCATCGGGCG GCGTGATGAG CCTCAACACC GCGAAGCCCG ATACGCGGGG CTTCGCCGGC
GAGGTGAACG CGATGGCGGG CCGCTTCGGC AGCTACGAGC TGGGCGGCAT GGTCAACGTG
CCACTGAACG ACATGGTCGC GATCCGCGCC GCCGGCAAAT GGGAAACCTC CAACGGCGAG
TTCAACAACA AGGCGCCGAT CGGCGGCGGC AACGGCCGCG ACTACAAGGC GGCGCGCCTT
TCGCTCCGCG CGACGCCGAC CGAGCAGCTG ACGATCGACC TGTCGTACAA CTACACGCGT
GAGAAGGACG ACGATTTCGG CCTGATCCAC ACCGGCGTGC TGAGCGACTT CATCAAGTCG
ATCTGCCCGG GCGTCACCTT CTCCTGCCCG GTCGATTCCA ACCTCGGCTT CTATCCGAAC
AACCGCCGCA ACTATGCGCA TGACGCGCCG CTGGTGGTGG ACAACGAATA TCACATCGCC
GTCGGCCGGG TCGCCTGGAC CGGCGAGAAT GTCGGCGTCA CCAGCATCAC CGGCTACGGC
TCGGCCAAGT TCGACCGCAG CGGCGAGCTC GACTTCTCGA GCGTCGACTT CCTGCGCGAA
GGCTTCAACT ATGAACGGCG CAAGAGCTTC TCGCAGGAAT TCCGCGTCCA GTCGGTCGGC
GACAAGCGGC TGAACTGGAT CGTCGGCGCC GTCTATGCGC AGGACAAGCA TCGCGAGGGC
GAGTTCATCG CGGCGGGCGT CCAGAACGAC ATCGGCCTGC CCGAGGATTT CCCGATCGAG
CTGTCGCACT ACAACCAGAA GATCACGTCA AAGGCGCTGT TCGCCGAAGC GACCTTCGAC
GTCACAGACG CGCTCTCGCT GACCGCCGGC GCCCGTTATT CGCACGACAA GATCAAGCGG
TTCGAGGACC AGATCGAGTT CGGCGGCCCG CTCCAGGCCG TGCAGGGCAG CCGCAGCTTC
AGCGACGTGT CGCCGCGCTT CGTGATCAAA TATAAGGCGG CGGACCACGT CAATCTCTAC
GCGAGCGCCT CGAAGGGCTG GAAATCGGGC GGCTTCGAGC TCGATCCGCA GCGCGCGCGC
AGCGACTTCG GCGCGGAGAC GCTGTGGAAC TACGAAGTGG GCGTGAAGAG CACCCTGCTC
GACAACCGCC TGCGCGCCAA CCTCGCGCTG TTCTACATCG ACTGGAACAA CGTGCAGGTC
AGCTCGGGCG TGATCGGCCG CGACGCCAAC GGCAACATCA TCAACTATGC CGGCATTTCG
AACGCGGCCA GCGCGACCAG CAAGGGCGCC GAGCTCGAAC TGCTCGCCGC GCCGACCGAC
CAGCTCGAAC TCGGGCTGAA CATCGGCTAT CTCAAGGCGC GGTTCGACAA GTTCGCCGAT
GCGCGCACCA ATTTCGGCAC GGTCGACCTG TCGGGCAAGC CGCTGCCCAA GGCTCCCGAA
TGGACGCTGT CGACCTTCGC GCAATATACC GTGCCGCTGA CCGGCGATTT CGAGGCGTTC
GTGCGCGGCG AATATTTCTA CACCGACGAC GCCTACACCA CGGTCAACAA CATCGCCGCG
GTGCTGACCG GCCAGCCGCG CTTCCCCTAT GAGGTGAAGG GCTATGGCAA GGCCAATCTG
CGGATCGGCG TGGAGAATGA CCGCTTCCGC ATCGTCGGCT ATGTCGAGAA CTTGTTCGAC
AAGAAATATT ACACCGCATC GTTCGACTTC GGCTTCGCCA ACGGCGCCGC CGTGGTGCCG
GGACTGCGGC GCTGGGGCGT GCGCGGCAGC GTGAAGTTCT GA
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| Protein sequence | MRRMTNQMLR MASGSAIAAL LAISGQASAQ AAAEAENQGL EDIVVTAQRR SESIQNVPVA
VTAFNTQELQ RANIQDVGAY FQNTPNVFIT DSPVRSGNNV SSSALGLALR GISNVGGNAS
SFGIYLDDFN ISNIALNPHL IDMERIEVLR GPQGTYFGRN ASGGVMSLNT AKPDTRGFAG
EVNAMAGRFG SYELGGMVNV PLNDMVAIRA AGKWETSNGE FNNKAPIGGG NGRDYKAARL
SLRATPTEQL TIDLSYNYTR EKDDDFGLIH TGVLSDFIKS ICPGVTFSCP VDSNLGFYPN
NRRNYAHDAP LVVDNEYHIA VGRVAWTGEN VGVTSITGYG SAKFDRSGEL DFSSVDFLRE
GFNYERRKSF SQEFRVQSVG DKRLNWIVGA VYAQDKHREG EFIAAGVQND IGLPEDFPIE
LSHYNQKITS KALFAEATFD VTDALSLTAG ARYSHDKIKR FEDQIEFGGP LQAVQGSRSF
SDVSPRFVIK YKAADHVNLY ASASKGWKSG GFELDPQRAR SDFGAETLWN YEVGVKSTLL
DNRLRANLAL FYIDWNNVQV SSGVIGRDAN GNIINYAGIS NAASATSKGA ELELLAAPTD
QLELGLNIGY LKARFDKFAD ARTNFGTVDL SGKPLPKAPE WTLSTFAQYT VPLTGDFEAF
VRGEYFYTDD AYTTVNNIAA VLTGQPRFPY EVKGYGKANL RIGVENDRFR IVGYVENLFD
KKYYTASFDF GFANGAAVVP GLRRWGVRGS VKF
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