Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4781 |
Symbol | |
ID | 5196724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 5258745 |
End bp | 5261006 |
Gene Length | 2262 bp |
Protein Length | 753 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640584338 |
Product | TonB-dependent receptor |
Protein accession | YP_001265256 |
Protein GI | 148557674 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.211672 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAGGA TGACCAACCA GATGCTGCGC ATGGCGAGCG GCAGCGCGAT CGCGGCCTTG CTGGCGATCA GCGGCCAGGC ATCGGCGCAG GCCGCGGCCG AGGCTGAGAA TCAGGGGCTG GAGGACATCG TCGTCACCGC CCAGCGGCGC AGCGAAAGCA TCCAGAACGT GCCGGTCGCG GTGACCGCGT TCAACACGCA GGAACTGCAG CGCGCGAACA TCCAGGACGT CGGCGCCTAT TTCCAGAACA CGCCCAACGT CTTCATCACC GACAGCCCGG TGCGCAGCGG CAACAACGTG TCGAGCAGCG CGCTCGGCCT GGCGCTGCGC GGCATCTCGA ACGTCGGCGG CAACGCGTCG TCGTTCGGCA TCTATCTCGA CGATTTCAAC ATCTCGAACA TCGCGCTCAA CCCGCACCTG ATCGACATGG AGCGGATCGA GGTGCTGCGC GGGCCGCAGG GCACCTATTT CGGACGCAAC GCATCGGGCG GCGTGATGAG CCTCAACACC GCGAAGCCCG ATACGCGGGG CTTCGCCGGC GAGGTGAACG CGATGGCGGG CCGCTTCGGC AGCTACGAGC TGGGCGGCAT GGTCAACGTG CCACTGAACG ACATGGTCGC GATCCGCGCC GCCGGCAAAT GGGAAACCTC CAACGGCGAG TTCAACAACA AGGCGCCGAT CGGCGGCGGC AACGGCCGCG ACTACAAGGC GGCGCGCCTT TCGCTCCGCG CGACGCCGAC CGAGCAGCTG ACGATCGACC TGTCGTACAA CTACACGCGT GAGAAGGACG ACGATTTCGG CCTGATCCAC ACCGGCGTGC TGAGCGACTT CATCAAGTCG ATCTGCCCGG GCGTCACCTT CTCCTGCCCG GTCGATTCCA ACCTCGGCTT CTATCCGAAC AACCGCCGCA ACTATGCGCA TGACGCGCCG CTGGTGGTGG ACAACGAATA TCACATCGCC GTCGGCCGGG TCGCCTGGAC CGGCGAGAAT GTCGGCGTCA CCAGCATCAC CGGCTACGGC TCGGCCAAGT TCGACCGCAG CGGCGAGCTC GACTTCTCGA GCGTCGACTT CCTGCGCGAA GGCTTCAACT ATGAACGGCG CAAGAGCTTC TCGCAGGAAT TCCGCGTCCA GTCGGTCGGC GACAAGCGGC TGAACTGGAT CGTCGGCGCC GTCTATGCGC AGGACAAGCA TCGCGAGGGC GAGTTCATCG CGGCGGGCGT CCAGAACGAC ATCGGCCTGC CCGAGGATTT CCCGATCGAG CTGTCGCACT ACAACCAGAA GATCACGTCA AAGGCGCTGT TCGCCGAAGC GACCTTCGAC GTCACAGACG CGCTCTCGCT GACCGCCGGC GCCCGTTATT CGCACGACAA GATCAAGCGG TTCGAGGACC AGATCGAGTT CGGCGGCCCG CTCCAGGCCG TGCAGGGCAG CCGCAGCTTC AGCGACGTGT CGCCGCGCTT CGTGATCAAA TATAAGGCGG CGGACCACGT CAATCTCTAC GCGAGCGCCT CGAAGGGCTG GAAATCGGGC GGCTTCGAGC TCGATCCGCA GCGCGCGCGC AGCGACTTCG GCGCGGAGAC GCTGTGGAAC TACGAAGTGG GCGTGAAGAG CACCCTGCTC GACAACCGCC TGCGCGCCAA CCTCGCGCTG TTCTACATCG ACTGGAACAA CGTGCAGGTC AGCTCGGGCG TGATCGGCCG CGACGCCAAC GGCAACATCA TCAACTATGC CGGCATTTCG AACGCGGCCA GCGCGACCAG CAAGGGCGCC GAGCTCGAAC TGCTCGCCGC GCCGACCGAC CAGCTCGAAC TCGGGCTGAA CATCGGCTAT CTCAAGGCGC GGTTCGACAA GTTCGCCGAT GCGCGCACCA ATTTCGGCAC GGTCGACCTG TCGGGCAAGC CGCTGCCCAA GGCTCCCGAA TGGACGCTGT CGACCTTCGC GCAATATACC GTGCCGCTGA CCGGCGATTT CGAGGCGTTC GTGCGCGGCG AATATTTCTA CACCGACGAC GCCTACACCA CGGTCAACAA CATCGCCGCG GTGCTGACCG GCCAGCCGCG CTTCCCCTAT GAGGTGAAGG GCTATGGCAA GGCCAATCTG CGGATCGGCG TGGAGAATGA CCGCTTCCGC ATCGTCGGCT ATGTCGAGAA CTTGTTCGAC AAGAAATATT ACACCGCATC GTTCGACTTC GGCTTCGCCA ACGGCGCCGC CGTGGTGCCG GGACTGCGGC GCTGGGGCGT GCGCGGCAGC GTGAAGTTCT GA
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Protein sequence | MRRMTNQMLR MASGSAIAAL LAISGQASAQ AAAEAENQGL EDIVVTAQRR SESIQNVPVA VTAFNTQELQ RANIQDVGAY FQNTPNVFIT DSPVRSGNNV SSSALGLALR GISNVGGNAS SFGIYLDDFN ISNIALNPHL IDMERIEVLR GPQGTYFGRN ASGGVMSLNT AKPDTRGFAG EVNAMAGRFG SYELGGMVNV PLNDMVAIRA AGKWETSNGE FNNKAPIGGG NGRDYKAARL SLRATPTEQL TIDLSYNYTR EKDDDFGLIH TGVLSDFIKS ICPGVTFSCP VDSNLGFYPN NRRNYAHDAP LVVDNEYHIA VGRVAWTGEN VGVTSITGYG SAKFDRSGEL DFSSVDFLRE GFNYERRKSF SQEFRVQSVG DKRLNWIVGA VYAQDKHREG EFIAAGVQND IGLPEDFPIE LSHYNQKITS KALFAEATFD VTDALSLTAG ARYSHDKIKR FEDQIEFGGP LQAVQGSRSF SDVSPRFVIK YKAADHVNLY ASASKGWKSG GFELDPQRAR SDFGAETLWN YEVGVKSTLL DNRLRANLAL FYIDWNNVQV SSGVIGRDAN GNIINYAGIS NAASATSKGA ELELLAAPTD QLELGLNIGY LKARFDKFAD ARTNFGTVDL SGKPLPKAPE WTLSTFAQYT VPLTGDFEAF VRGEYFYTDD AYTTVNNIAA VLTGQPRFPY EVKGYGKANL RIGVENDRFR IVGYVENLFD KKYYTASFDF GFANGAAVVP GLRRWGVRGS VKF
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