Gene Swit_4773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4773 
Symbol 
ID5200913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5251474 
End bp5252256 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content70% 
IMG OID640584329 
Producthypothetical protein 
Protein accessionYP_001265248 
Protein GI148557666 
COG category[S] Function unknown 
COG ID[COG5400] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0149963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0439036 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAGG GGATGGTGCT CGGCATGGCG GGGGCGATGG CGCTCGCGCT TTCGGGCACG 
GCGCAGGCGC AGATCAGGAC GGTCGACCCC AACGCCGCGA GCGACCTCGC CCCCGTTCCG
GCGAGCGAGG CCAATTACGG CACCCGGGTC TCGGCGCCAG CGGCTGAGGC CGCATCCGCC
GCGCCGGCCG GCACGACCGA CGCCGCCGCC GTCGGCAACG ACGTCGCCAC CGGCGATTCG
GTCACCGTCG AGGGCACGCC GATGCCGGCC CGCGCCCAGG CCGCCGATGC CGCCGCCAAT
TCGACCTATG CGCAGGACGA CGTGCTCGCC GCCGCCGAGG GCGTGTTCGG CAAGGGCGCC
GAGGGCCTCG CCAAGCTGGT CGAGAAGATC TTCGCCGAAC AGGGCCGCCC CAACGCCTAT
ATCGCGGGCC GCGAAGCCGG CGGCGCGATC ATCGTCGGCG TGCGCTACGG CTCGGGCACG
CTGTTCCACA AGGTCGAGGG ACAGCAGCCG ATCTACTGGA CCGGCCCGTC GCTGGGCTTC
GACCTCGGCG CCAACGGCGC CAAGAGCTTC GTGCTGGTCT ACAACCTGTT CGACACCGCC
GACGCCTATC ATCGCTTCCC GGCGGTCGAG GGCACGGCTT ATATCGTCGG CGGCTTCACC
GCGACCTATC TGCGCCGCGG CGACGTGGTG ATGATCCCGA TCCGGCTCGG CGTCGGCTGG
CGGCTCGGCG TCAATGTCGG CTATATGAAC TTCACCCACA AATCGAAGAT CGTGCCCTTC
TGA
 
Protein sequence
MVKGMVLGMA GAMALALSGT AQAQIRTVDP NAASDLAPVP ASEANYGTRV SAPAAEAASA 
APAGTTDAAA VGNDVATGDS VTVEGTPMPA RAQAADAAAN STYAQDDVLA AAEGVFGKGA
EGLAKLVEKI FAEQGRPNAY IAGREAGGAI IVGVRYGSGT LFHKVEGQQP IYWTGPSLGF
DLGANGAKSF VLVYNLFDTA DAYHRFPAVE GTAYIVGGFT ATYLRRGDVV MIPIRLGVGW
RLGVNVGYMN FTHKSKIVPF