Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4773 |
Symbol | |
ID | 5200913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 5251474 |
End bp | 5252256 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640584329 |
Product | hypothetical protein |
Protein accession | YP_001265248 |
Protein GI | 148557666 |
COG category | [S] Function unknown |
COG ID | [COG5400] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0149963 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0439036 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAAGG GGATGGTGCT CGGCATGGCG GGGGCGATGG CGCTCGCGCT TTCGGGCACG GCGCAGGCGC AGATCAGGAC GGTCGACCCC AACGCCGCGA GCGACCTCGC CCCCGTTCCG GCGAGCGAGG CCAATTACGG CACCCGGGTC TCGGCGCCAG CGGCTGAGGC CGCATCCGCC GCGCCGGCCG GCACGACCGA CGCCGCCGCC GTCGGCAACG ACGTCGCCAC CGGCGATTCG GTCACCGTCG AGGGCACGCC GATGCCGGCC CGCGCCCAGG CCGCCGATGC CGCCGCCAAT TCGACCTATG CGCAGGACGA CGTGCTCGCC GCCGCCGAGG GCGTGTTCGG CAAGGGCGCC GAGGGCCTCG CCAAGCTGGT CGAGAAGATC TTCGCCGAAC AGGGCCGCCC CAACGCCTAT ATCGCGGGCC GCGAAGCCGG CGGCGCGATC ATCGTCGGCG TGCGCTACGG CTCGGGCACG CTGTTCCACA AGGTCGAGGG ACAGCAGCCG ATCTACTGGA CCGGCCCGTC GCTGGGCTTC GACCTCGGCG CCAACGGCGC CAAGAGCTTC GTGCTGGTCT ACAACCTGTT CGACACCGCC GACGCCTATC ATCGCTTCCC GGCGGTCGAG GGCACGGCTT ATATCGTCGG CGGCTTCACC GCGACCTATC TGCGCCGCGG CGACGTGGTG ATGATCCCGA TCCGGCTCGG CGTCGGCTGG CGGCTCGGCG TCAATGTCGG CTATATGAAC TTCACCCACA AATCGAAGAT CGTGCCCTTC TGA
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Protein sequence | MVKGMVLGMA GAMALALSGT AQAQIRTVDP NAASDLAPVP ASEANYGTRV SAPAAEAASA APAGTTDAAA VGNDVATGDS VTVEGTPMPA RAQAADAAAN STYAQDDVLA AAEGVFGKGA EGLAKLVEKI FAEQGRPNAY IAGREAGGAI IVGVRYGSGT LFHKVEGQQP IYWTGPSLGF DLGANGAKSF VLVYNLFDTA DAYHRFPAVE GTAYIVGGFT ATYLRRGDVV MIPIRLGVGW RLGVNVGYMN FTHKSKIVPF
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