| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4772 |
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| Symbol | |
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| ID | 5200912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5250687 |
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| End bp | 5251460 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640584328 |
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| Product | hypothetical protein |
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| Protein accession | YP_001265247 |
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| Protein GI | 148557665 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1496] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00107349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0417622 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATGG CCGTCCGTCC GATCCGGATC GACGCGCTCG GCGCGCTGCC GCATGGCTTC
CTCGGCCGCG AGGGCGGGGT GTCGCAGGGC ATCCATGCCG GGCTCAATGT CGGGCTGGGA
TCGGATGACG ATCGCGACGC GATCCGCGAG AATCGCCGGC GGGCGGTCGA GGCGGTGGCG
CCGGGCCATG ACCTCGTCAC GCTGCATCAG GTCCATTCGG CCGACGCGGT GGCGGTCACC
ACCCCCTTCG CCGACGATGA ACGGCCGCAT GCCGATGCGC TGGTCACCGA CCGGCCGGGC
CTGCTGCTCG GCATCCTCAC CGCCGATTGC GTGCCGGTGC TGTTCGCCGA TGCGGCGGCC
GGCGTCGTCG GCGCGGCGCA TGCCGGCTGG AAGGGGGCGC TGTCGGGGGT GGCCGACGCC
ACTCTGGTGG AGATGGAAGC GTTGGGCGCG GATCGCTCGC GCGTCGTTGC GGCGATCGGA
CCGTGCATCG CGCGGGCGAG CTATGAGGTC GACGAGGGCT TCGTCCGCCG CTTCGAGGCC
GACGATCCCG CCAATGAGCG TTTCTTCGCC GACGGCCGCC GCGCCGGCCA TGCCCAGTTC
GATATCGAGG CCTATGTCGC GCACCGGCTG GCGGCGGCCG GGGTGGGGCG GGTGATCGCG
ATCGGCGAGG ACACCTATGC CCAGCCCGAT CGCTTCTTCA GCTTCCGCCG GGCCACCCAT
CTGGGCGAGC CCGGCTATGG GCGGCAGATC TCGCTGATCG GGCTGCCCGG CTAA
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| Protein sequence | MSMAVRPIRI DALGALPHGF LGREGGVSQG IHAGLNVGLG SDDDRDAIRE NRRRAVEAVA
PGHDLVTLHQ VHSADAVAVT TPFADDERPH ADALVTDRPG LLLGILTADC VPVLFADAAA
GVVGAAHAGW KGALSGVADA TLVEMEALGA DRSRVVAAIG PCIARASYEV DEGFVRRFEA
DDPANERFFA DGRRAGHAQF DIEAYVAHRL AAAGVGRVIA IGEDTYAQPD RFFSFRRATH
LGEPGYGRQI SLIGLPG
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