| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4770 |
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| Symbol | |
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| ID | 5200910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5249324 |
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| End bp | 5250394 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640584326 |
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| Product | chorismate synthase |
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| Protein accession | YP_001265245 |
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| Protein GI | 148557663 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0082] Chorismate synthase |
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| TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00112305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0417622 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTCA ACAGCTTCGG CCGCGTCTTT CGCTTCTCGA CCTGGGGGGA GAGCCATGGG
CCCGCCATCG GCGCGGTGGT CGACGGCTGT CCGCCGGGCC TCGAGCTGAG CGAGGCCGAT
ATCCAGCCGT GGCTCGACAA GCGCCGGCCG GGCACCTCGC GCTTCACCAC CCAGCGGCAG
GAGCCCGACC AGGTCCGCAT CCTGTCGGGC GTGTTCGAAG GGCGGACCAC CGGCACGCCG
ATCAGCCTGA TGATCGACAA TGTCGACCAG CGCTCGAAGG ATTATTCGGA GGTCGCGCTC
GCCTATCGGC CCGGCCATGC CGACTATGCC TATGATGCCA AATATGGCTT CCGCGACCAT
CGCGGCGGCG GGCGATCCTC GGCGCGCGAG ACGGCGTCGC GGGTGGCGGC GGGCGCGGTC
GCGCGGCTGG TGATTCCAGA GGTCAGGATC CGGGCCTATC TGATCGAACT GGGCGGCGAC
AGGATCGATC CTGCCGCGTT CGACGATGCC GCGATCGACG AGAATCCGTT CTTCTGCCCC
GACCGCGCGG CGGCGGCGCG CTGGGAAGCG ATCGTCGACG ATGCGCGCAA GGCCGGCTCC
TCGGTCGGCG CCGTCGTCGA ATGCGTCGCG GAGGGCGTGC CGGCCGGCTG GGGCGCGCCG
CTCTACGCCA AGCTCGACAG CGAGCTGGCG GCGGCCTGCA TGTCGATCAA TGCGGTCAAG
GGCGTCGAGA TCGGCGACGG CTTCGCCGCG GCGCGGCTGA CCGGCGAGAC CAACGCCGAT
CCGATGCGGC CCGGCAATGA CGGCAAGCCG GTGTTCCTCG CCAACCATGC CGGCGGGATC
GCGGGCGGCA TCGCCACCGG CCAGCCGGTG GTGGTGCGGA TCGCGCTCAA GCCGACCTCG
TCGATCCTGA CCCCGGTCGA GACGATCGGG CGCGACGGCA AGGCCGCCGA CATCCGCACC
AAGGGACGCC ACGATCCCTG TGTCGGCATC CGCGCCGCGC CGGTGCTGGA GGCGATGGTC
GCGCTGGTGC TGGCCGACCA GAAGCTGCTG CACCGGGCGC AGATCGGATG A
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| Protein sequence | MSFNSFGRVF RFSTWGESHG PAIGAVVDGC PPGLELSEAD IQPWLDKRRP GTSRFTTQRQ
EPDQVRILSG VFEGRTTGTP ISLMIDNVDQ RSKDYSEVAL AYRPGHADYA YDAKYGFRDH
RGGGRSSARE TASRVAAGAV ARLVIPEVRI RAYLIELGGD RIDPAAFDDA AIDENPFFCP
DRAAAARWEA IVDDARKAGS SVGAVVECVA EGVPAGWGAP LYAKLDSELA AACMSINAVK
GVEIGDGFAA ARLTGETNAD PMRPGNDGKP VFLANHAGGI AGGIATGQPV VVRIALKPTS
SILTPVETIG RDGKAADIRT KGRHDPCVGI RAAPVLEAMV ALVLADQKLL HRAQIG
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