| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4759 |
|---|
| Symbol | |
|---|
| ID | 5198151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 5238144 |
|---|
| End bp | 5240681 |
|---|
| Gene Length | 2538 bp |
|---|
| Protein Length | 845 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640584315 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001265234 |
|---|
| Protein GI | 148557652 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2307] Uncharacterized protein conserved in bacteria
[COG2308] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.160273 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0614086 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGGCG ACATGATGGC CGAGCTGCCG GGCCTGCCGA GCCTCGGGGA AGGCTGGCTC
CAGAGCTATA TCGCCATGGC GGGGATGGCC GACGCGCTGC GCGGCGACGT CGGCCGCGGC
GCGCGCTGGT GGCATGCGCT GTTCGAGGGG ATCGGGCGGC TCAGCGAAGG CCGGCTCGAC
CTGCTCCAGC AGCGCATGGC GCGGCAGGTG CAGGAACTGG GCACCGCCTT CCGCCTGCCG
GGCGAGGAGG GCGAGCGGCC CTGGCCGGTC TCGGCGGTGC CGCTGCTGAT CGGCGAGGAC
GACTGGGCGG TGATCGCCGC CGGGATCGCC CAGCGCGCCG AGCTGCTCGA ACGGCTGCTC
GACGACGTCT TCGGCGAACA GACGGTCGTC GCCAGCGGCG CGGTGCCCGC CGCGCTCGTC
ACCGGCAGCC GCGCCTTCTG GCGATCGCAG GTCGGGGTGA AGCCGCCGGG CGGCCACCAT
CTCCACATCT ACGCGGCCGA TATCGGCCGC GATCCGAGCG GCGAATGGCG CGTGCTCGAC
GATCATGTCC GCGCCCCGGT CGGCGCGGGC TATGCGCTGG AGAACCGGCT GGCGTCGAGC
CGGCTGATGG GCGCGCTCCA GACCCGGCTT CATGTCGAGC GGCTCGCGCC CTTCTTCTCG
GCCTTCCGCG AGGGACTGTC GGCGGTCTGC CGCCGCTCCG ATCCGCGCAT CGGCCTGCTG
ACGCCGGGCC GCTACAATCA GAGCTATGCC GAGCAGGCGC ATCTCGCCCG TTATCTCGGC
CTGCTGCTGG TCGAGGGCAG CGACCTCTCG GTGACCGAGG ACGGGCTGTT CGTCCGCACG
ATCGAGGGAT TGAAGCGGGT CGACGCGCTG TGGCGCCGGA TCGATTCGCG CTATCTCGAC
CCGCTCGCCT TCGATGCGGG ATCGGCGATC GGCGTGCCCG GGCTGATGGA CGCGATGGCG
GCGGGTCAGG CGGTGATCGC CAACGCGCCG GGCGCGGGGG CGGTCGAATC GACCGCGATG
GGCGCCTTCC TGCCGGCGCT CGCGCAACGG CTGCTGGGCG AGCATCTGAT CCTTCCCAAC
ATCGCGACCT GGTGGTGCGG GCAGGACGGG CCGCGCGCGC AGGTCGAGGC GCGGCTCGAC
GAGCTGCTGA TCGCGCCGGC GTTCAGCGAG GCGCCGCTCG GCCTGCCGCG TGGCCGCCCG
GTGCTCGCCG CGACGCTCAG CCGCGCCCAG CGCGAGATAC TGCTCGCCGA CATGCGCAAC
CGGCCGACCG ACTATGTCGC GATGGAGGAC GTCCATCTGT CGACCACGCC CGCCGTGCTC
GACGGGCAGC TCGTGCCGCG TCCCTTCACC GTGCGCGTGT TCGCGGCGCG CGACGGCGAA
GGCAAGTGGA CGGTGATGCC GGGCGGCTTC GCCCGGATCG GCGACGATTC CGACGCGCGC
GTCACGGTGA TGGGCGAGGG GGCCTTCTCC GCCGACGTCT GCGTGGTCGG CAGGAAGACG
GTCGATCCGG TCTCGCTGCT GCCGCAGAAG GTGCCGATCC GCCGCAATCC CGGCACGTTG
CCGAGCCGCG CGGCCGACAA TCTCTACTGG CTCGGCCGCT ATCTGGAGCG GGGCGAGGCG
ACGCTGCGGC TGGTCCGCGC GACGCTGGGC GGCTCGATCG TCGCCGATGG CGGCGCGGCG
CTGTTCCCGC TGACGCTCGA CCGGCTCGGC ACGATGCTGA TCGCCTCGGG CGCGGCGATC
GCCGAGCGGC CGGCGGCGGA GGACGGCGAG GAGCCCGAGG AAGAGGAAGG CGCGGGCGAG
ACCCACGACC TGCGCGAGTT GGCGCTGCTC GCGCTCGACG GCGACGGGCC GGCGAGCATC
AAGGTGCTGA TGCGCCACGC CCGCGCCATC GCCAGCGGTA CGCGCGACCG CCTGTCGGGC
GACGTCTGGC GTCTCGTCGA CGCGCCGCTG CCGGCGGCGG CATCCGACGA TGCCGAGGCG
ATGCTGGCGC GCGCGGTCGA CCTGCAGGAG CGCTTCTCGG CGCTGGCCGG GCTGTCGGCG
GAGAATATGG GCCGCACCGC CGGCTGGCGC TTCCACGACA TGGGGCGGCG GATCGAACGG
GCGCAGTGGG GATGCCGCCA GGTCCGCATC TTCGGCGCCG CCGACGCCTC GGCCGACGAC
CTCACCACCC TGCTCGACCT GTTCGACAGC CAGATCAGCT ATCGCGCGCG CTATCTCGCC
GGGCTCGCGC TCGAACCGGT CCGTGACCTC GTCGCGCTCG ATCCCTACAA CCCGCGCTCG
ATCGCTTTCC AGGTCGAGCG GATCGCCCGC CATCTGGCCG AGCTGCCGGC GCTGCGCGAC
GACGGCATGG CCGAGGCGCA CGAGATGATC TTCTATCGGA TCGAGGCCAC GCTCCGCACC
GCCACCGCCG AGACGCTCGA CGCGGCGACG GTGCTGGGGC TGGAGAACAT GTTCTCCGAG
CTGTCCAACG CGATCAGCAC GCGCTTCTTC CTGCAGGGCA GCGAGGGTTT CCGCATGTCC
GGCATGACGC TGGCCTGA
|
|---|
| Protein sequence | MQGDMMAELP GLPSLGEGWL QSYIAMAGMA DALRGDVGRG ARWWHALFEG IGRLSEGRLD
LLQQRMARQV QELGTAFRLP GEEGERPWPV SAVPLLIGED DWAVIAAGIA QRAELLERLL
DDVFGEQTVV ASGAVPAALV TGSRAFWRSQ VGVKPPGGHH LHIYAADIGR DPSGEWRVLD
DHVRAPVGAG YALENRLASS RLMGALQTRL HVERLAPFFS AFREGLSAVC RRSDPRIGLL
TPGRYNQSYA EQAHLARYLG LLLVEGSDLS VTEDGLFVRT IEGLKRVDAL WRRIDSRYLD
PLAFDAGSAI GVPGLMDAMA AGQAVIANAP GAGAVESTAM GAFLPALAQR LLGEHLILPN
IATWWCGQDG PRAQVEARLD ELLIAPAFSE APLGLPRGRP VLAATLSRAQ REILLADMRN
RPTDYVAMED VHLSTTPAVL DGQLVPRPFT VRVFAARDGE GKWTVMPGGF ARIGDDSDAR
VTVMGEGAFS ADVCVVGRKT VDPVSLLPQK VPIRRNPGTL PSRAADNLYW LGRYLERGEA
TLRLVRATLG GSIVADGGAA LFPLTLDRLG TMLIASGAAI AERPAAEDGE EPEEEEGAGE
THDLRELALL ALDGDGPASI KVLMRHARAI ASGTRDRLSG DVWRLVDAPL PAAASDDAEA
MLARAVDLQE RFSALAGLSA ENMGRTAGWR FHDMGRRIER AQWGCRQVRI FGAADASADD
LTTLLDLFDS QISYRARYLA GLALEPVRDL VALDPYNPRS IAFQVERIAR HLAELPALRD
DGMAEAHEMI FYRIEATLRT ATAETLDAAT VLGLENMFSE LSNAISTRFF LQGSEGFRMS
GMTLA
|
|---|
| |