Gene Swit_4755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4755 
Symbol 
ID5197118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5232389 
End bp5233762 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content74% 
IMG OID640584311 
ProductGntR family transcriptional regulator 
Protein accessionYP_001265230 
Protein GI148557648 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.151442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0255466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGGA CTCCCACGCT GCAGGATGAC GCCGACACGG TGTCGGGCCG GCTGCTGTCC 
GCCCTGCGCC GCGACATCGC GGAGGGGCGG CTGTCGCCCG GCACCCGCCT GCCCCCGCAC
CGCGACCTCG CCCATCGGCT GGGCATCGGC ATCGGCACGG TGACGTCGGT CTATGGCGAG
GCGGCGCGGC AGGGCCTGCT CACCGCGACG GTCGGGCGCG GCAGCTTCGT CGCCGACGCG
GTCGCGCGGT CGGATCGCGG CGACGGCGGC ATCGACCTCA GCCGCAACGT CCCCCCGCTC
GGCTCGGCGC AGCGACGCCT GCCGGCGACG CTCGCCCGCC TCGCCCGCCG TCCCGACCTC
GGCCTGCTGC TCGACTATGC GCCGCCCGCC GGGCTCGATG CGCATCGCCG CACGGCGGCG
AGCTGGCTCC GCCGGATCGG CGCCTTCCCC GATGCGCGGG CCGACCGGCT GATCGTCACC
ACCGGCGCCC AGCAGGCGAT GACCCTCGCC TTCGACATAT TGTGCGCGCC CGGCGACGCG
ATCATGACCG AGGCGGCCTC CTATTTCGGC GTCCGCTCGA TCGCCCAGGC CGGCGGCCAG
GCGACGATCG GCCTGGCGAT GGACGAGGAG GGCCTGCTGC CCGACGCGCT CGATCGCGCC
GCGGCCGGCG GGGCGCGGGT GCTCTACACC CTCCCCACCC TCCAGAACCC GACCGGCCGG
ATCATGGGCG AGCAGCGCCG CCGCGACATC GCCGCGATCG CCCGCCGCCG CGACCTGTGG
ATCGTCGAGG ACGACCTCTA TTCGATCTAC GCGACCGGCG GCACGCCGGC CCCGCTCGCC
GCGCATGCGC CCGAACGCTG CTTCTACATC CACGGCACGT CGAAGGTGTT CGGCCCCGGC
CTGCGCACCG GCTTCCTGAT CGCCCCCGAC GACGACCGTT TCGAGCGGAT ATTGCGGCTG
ATCCGGGCGC GGATCTATGC GCCCGCGACG ATGGGGCCGA CCGTCGCCTG CCAGTGGATC
GAGGACGGAT CGGCCGACGA GATCGTCGCC GAGACGCTGG ACGAGATGCT GGCGCGCGGC
CGGCTGGCGA TCGAGCGGCT CGGCGCCGCC GCCAGCCCGC CCGCCGATCC GCGCTGCCCG
CATCTCTGGC TGCCGATGCC CGAGCTGGAG GCCGAGCGGG TGACGGCGCG GGCGCTGCGC
GCGGGCATCA CGCTGACGCC GCCTTCCGCC CCGGTGATCG ATCCTTCCCT GATCTCCGGC
GTGCGCCTAT GCCTTGGCGC CGCGGCGGAC CGGACCGAAC TGGGCCTTGC GCTCGACCGG
ATCGCCACGG CACTGGACAG CCGTCGAACC GAGGCCGCCG AGGCGGTGAT ATGA
 
Protein sequence
MTWTPTLQDD ADTVSGRLLS ALRRDIAEGR LSPGTRLPPH RDLAHRLGIG IGTVTSVYGE 
AARQGLLTAT VGRGSFVADA VARSDRGDGG IDLSRNVPPL GSAQRRLPAT LARLARRPDL
GLLLDYAPPA GLDAHRRTAA SWLRRIGAFP DARADRLIVT TGAQQAMTLA FDILCAPGDA
IMTEAASYFG VRSIAQAGGQ ATIGLAMDEE GLLPDALDRA AAGGARVLYT LPTLQNPTGR
IMGEQRRRDI AAIARRRDLW IVEDDLYSIY ATGGTPAPLA AHAPERCFYI HGTSKVFGPG
LRTGFLIAPD DDRFERILRL IRARIYAPAT MGPTVACQWI EDGSADEIVA ETLDEMLARG
RLAIERLGAA ASPPADPRCP HLWLPMPELE AERVTARALR AGITLTPPSA PVIDPSLISG
VRLCLGAAAD RTELGLALDR IATALDSRRT EAAEAVI