Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4755 |
Symbol | |
ID | 5197118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 5232389 |
End bp | 5233762 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640584311 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001265230 |
Protein GI | 148557648 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.151442 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0255466 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTGGA CTCCCACGCT GCAGGATGAC GCCGACACGG TGTCGGGCCG GCTGCTGTCC GCCCTGCGCC GCGACATCGC GGAGGGGCGG CTGTCGCCCG GCACCCGCCT GCCCCCGCAC CGCGACCTCG CCCATCGGCT GGGCATCGGC ATCGGCACGG TGACGTCGGT CTATGGCGAG GCGGCGCGGC AGGGCCTGCT CACCGCGACG GTCGGGCGCG GCAGCTTCGT CGCCGACGCG GTCGCGCGGT CGGATCGCGG CGACGGCGGC ATCGACCTCA GCCGCAACGT CCCCCCGCTC GGCTCGGCGC AGCGACGCCT GCCGGCGACG CTCGCCCGCC TCGCCCGCCG TCCCGACCTC GGCCTGCTGC TCGACTATGC GCCGCCCGCC GGGCTCGATG CGCATCGCCG CACGGCGGCG AGCTGGCTCC GCCGGATCGG CGCCTTCCCC GATGCGCGGG CCGACCGGCT GATCGTCACC ACCGGCGCCC AGCAGGCGAT GACCCTCGCC TTCGACATAT TGTGCGCGCC CGGCGACGCG ATCATGACCG AGGCGGCCTC CTATTTCGGC GTCCGCTCGA TCGCCCAGGC CGGCGGCCAG GCGACGATCG GCCTGGCGAT GGACGAGGAG GGCCTGCTGC CCGACGCGCT CGATCGCGCC GCGGCCGGCG GGGCGCGGGT GCTCTACACC CTCCCCACCC TCCAGAACCC GACCGGCCGG ATCATGGGCG AGCAGCGCCG CCGCGACATC GCCGCGATCG CCCGCCGCCG CGACCTGTGG ATCGTCGAGG ACGACCTCTA TTCGATCTAC GCGACCGGCG GCACGCCGGC CCCGCTCGCC GCGCATGCGC CCGAACGCTG CTTCTACATC CACGGCACGT CGAAGGTGTT CGGCCCCGGC CTGCGCACCG GCTTCCTGAT CGCCCCCGAC GACGACCGTT TCGAGCGGAT ATTGCGGCTG ATCCGGGCGC GGATCTATGC GCCCGCGACG ATGGGGCCGA CCGTCGCCTG CCAGTGGATC GAGGACGGAT CGGCCGACGA GATCGTCGCC GAGACGCTGG ACGAGATGCT GGCGCGCGGC CGGCTGGCGA TCGAGCGGCT CGGCGCCGCC GCCAGCCCGC CCGCCGATCC GCGCTGCCCG CATCTCTGGC TGCCGATGCC CGAGCTGGAG GCCGAGCGGG TGACGGCGCG GGCGCTGCGC GCGGGCATCA CGCTGACGCC GCCTTCCGCC CCGGTGATCG ATCCTTCCCT GATCTCCGGC GTGCGCCTAT GCCTTGGCGC CGCGGCGGAC CGGACCGAAC TGGGCCTTGC GCTCGACCGG ATCGCCACGG CACTGGACAG CCGTCGAACC GAGGCCGCCG AGGCGGTGAT ATGA
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Protein sequence | MTWTPTLQDD ADTVSGRLLS ALRRDIAEGR LSPGTRLPPH RDLAHRLGIG IGTVTSVYGE AARQGLLTAT VGRGSFVADA VARSDRGDGG IDLSRNVPPL GSAQRRLPAT LARLARRPDL GLLLDYAPPA GLDAHRRTAA SWLRRIGAFP DARADRLIVT TGAQQAMTLA FDILCAPGDA IMTEAASYFG VRSIAQAGGQ ATIGLAMDEE GLLPDALDRA AAGGARVLYT LPTLQNPTGR IMGEQRRRDI AAIARRRDLW IVEDDLYSIY ATGGTPAPLA AHAPERCFYI HGTSKVFGPG LRTGFLIAPD DDRFERILRL IRARIYAPAT MGPTVACQWI EDGSADEIVA ETLDEMLARG RLAIERLGAA ASPPADPRCP HLWLPMPELE AERVTARALR AGITLTPPSA PVIDPSLISG VRLCLGAAAD RTELGLALDR IATALDSRRT EAAEAVI
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