| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4754 |
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| Symbol | |
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| ID | 5197117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 5231790 |
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| End bp | 5232392 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640584310 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_001265229 |
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| Protein GI | 148557647 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.1157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0209318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGAGG CGCAATTGAC CACCGAACCC ACCGATCCCC ACAGCCTGTT CCGGAGCTGG
TTCGCCGAGG CGAAGGCGTC CGAGCCCAAC GATCCCGAGG CGATGGCGGT CGCCACCGTC
GGCGCCGACG GGCAGCCCTC GGTGCGCATG GTGCTGCTCA AGGGCCATGA CGCGCGCGGC
TTCGTCTTCT ACACCAATTA TGAGAGCCGC AAGGCGACCC AGCTCCTCGA AACGGGCCGC
GCCGCCCTGC TCTTCCACTG GAAATCGCTG CGCCGCCAGG TCCGCATCGA GGGGCCCGTG
TCGAAGGTGA GCCCGGAGGA AGGCGACGCC TATTTCGCGA CCCGCCACCG CGATTCGCAG
ATCGGCGCCT GGGCCTCGGA CCAGTCGCGC CCGCTCGACA GCCGCGCGAC CTTCGAGGCG
CGCTACGAGG AGATGCTGCG CCGCTTCGAG GGCGGCCCCG TTCCCCGGCC GCCGCACTGG
TCGGGCTTCC GCGTCGCGCC GGAGCGGATC GAGTTCTGGC AGGACCGCGC CCATCGCCTG
CACGAGCGCC GGCTGTTCAC GCGCAGCGGC GACGGCTGGA GCGAAGGCCT GCTCTACCCA
TGA
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| Protein sequence | MSEAQLTTEP TDPHSLFRSW FAEAKASEPN DPEAMAVATV GADGQPSVRM VLLKGHDARG
FVFYTNYESR KATQLLETGR AALLFHWKSL RRQVRIEGPV SKVSPEEGDA YFATRHRDSQ
IGAWASDQSR PLDSRATFEA RYEEMLRRFE GGPVPRPPHW SGFRVAPERI EFWQDRAHRL
HERRLFTRSG DGWSEGLLYP
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