Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4746 |
Symbol | |
ID | 5196615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 5225467 |
End bp | 5226201 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640584302 |
Product | hypothetical protein |
Protein accession | YP_001265221 |
Protein GI | 148557639 |
COG category | [S] Function unknown |
COG ID | [COG2968] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.183465 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACATG AATTGCTGAA GATCGGTCTG GCCATGCCGG TCGCCCTGGC GCTGATGGCG CCGGCTTCGG CGCAGCAGGC GACGGCCGGT CCGCAGCCGA TCGGCGGCAC GCGGCTCGAC ATCGTCGCCA GCGGCGAGGT GAGCGCGGTG CCCGACATCG CGACGATCGG GGCGGGCGTC GTCACCCAGC AGCCGACCGC CGCGGCGGCG ATGAGCGAGA ATGCCAGCCG CACCGCGGCG ACCGTCGCCG CGATCCGCAA GGCCGGCGTC GCAGACCGCG ACATCCAGAC GACCGCGATC TCGCTGAGCC CGCAATATCG CTATGCCGAC AACCAGCCGC CGGTGATCAC CGGCTACCAG GCGTCGAGCC GGGTGAGCGT GCGCTTCCGC GACGTCAAGA AGGCGGGCCC GATCCTCGAT TCGCTGGTCG CGGCGGGCGC CAACCAGATC GACGGCCCGA CCCTGTCGAT CGACAAGCCC GAGCCGCTGC TCGACCAGGC GCGCCAGAAG GCGGTCGCCG AGGCGCGGGC GCGCGCCGAC CTCTATGCGC GCGCCGCCGG CCTGTCGGTG AAGCGGATCG TCGCGATCAG CGAGGGCAGC TTCGAACCGC CGATGATGCC GCGTCCGGCG CCGATGATGA TGATGGCGCG CGGCAAGGAA GCCGCCGACA CCTCGATCGA GGCGGGCGAG CAGAAATTGT CGATCAGCCT GTCGGTGACG TTCGAGCTGA ACTGA
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Protein sequence | MGHELLKIGL AMPVALALMA PASAQQATAG PQPIGGTRLD IVASGEVSAV PDIATIGAGV VTQQPTAAAA MSENASRTAA TVAAIRKAGV ADRDIQTTAI SLSPQYRYAD NQPPVITGYQ ASSRVSVRFR DVKKAGPILD SLVAAGANQI DGPTLSIDKP EPLLDQARQK AVAEARARAD LYARAAGLSV KRIVAISEGS FEPPMMPRPA PMMMMARGKE AADTSIEAGE QKLSISLSVT FELN
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