Gene Swit_4746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4746 
Symbol 
ID5196615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5225467 
End bp5226201 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content71% 
IMG OID640584302 
Producthypothetical protein 
Protein accessionYP_001265221 
Protein GI148557639 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.183465 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACATG AATTGCTGAA GATCGGTCTG GCCATGCCGG TCGCCCTGGC GCTGATGGCG 
CCGGCTTCGG CGCAGCAGGC GACGGCCGGT CCGCAGCCGA TCGGCGGCAC GCGGCTCGAC
ATCGTCGCCA GCGGCGAGGT GAGCGCGGTG CCCGACATCG CGACGATCGG GGCGGGCGTC
GTCACCCAGC AGCCGACCGC CGCGGCGGCG ATGAGCGAGA ATGCCAGCCG CACCGCGGCG
ACCGTCGCCG CGATCCGCAA GGCCGGCGTC GCAGACCGCG ACATCCAGAC GACCGCGATC
TCGCTGAGCC CGCAATATCG CTATGCCGAC AACCAGCCGC CGGTGATCAC CGGCTACCAG
GCGTCGAGCC GGGTGAGCGT GCGCTTCCGC GACGTCAAGA AGGCGGGCCC GATCCTCGAT
TCGCTGGTCG CGGCGGGCGC CAACCAGATC GACGGCCCGA CCCTGTCGAT CGACAAGCCC
GAGCCGCTGC TCGACCAGGC GCGCCAGAAG GCGGTCGCCG AGGCGCGGGC GCGCGCCGAC
CTCTATGCGC GCGCCGCCGG CCTGTCGGTG AAGCGGATCG TCGCGATCAG CGAGGGCAGC
TTCGAACCGC CGATGATGCC GCGTCCGGCG CCGATGATGA TGATGGCGCG CGGCAAGGAA
GCCGCCGACA CCTCGATCGA GGCGGGCGAG CAGAAATTGT CGATCAGCCT GTCGGTGACG
TTCGAGCTGA ACTGA
 
Protein sequence
MGHELLKIGL AMPVALALMA PASAQQATAG PQPIGGTRLD IVASGEVSAV PDIATIGAGV 
VTQQPTAAAA MSENASRTAA TVAAIRKAGV ADRDIQTTAI SLSPQYRYAD NQPPVITGYQ
ASSRVSVRFR DVKKAGPILD SLVAAGANQI DGPTLSIDKP EPLLDQARQK AVAEARARAD
LYARAAGLSV KRIVAISEGS FEPPMMPRPA PMMMMARGKE AADTSIEAGE QKLSISLSVT
FELN