| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4726 |
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| Symbol | |
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| ID | 5198368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 5195061 |
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| End bp | 5196938 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640584281 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001265201 |
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| Protein GI | 148557619 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.140851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCAG GGCGCCGTCC TCCCTATCTG GCTCTGGCCG GACTGCTGGT CGCGATCCTC
GCGGCGGTCG CCGCGCTGTT CCTGACGCGC GCGCAGAGCC GGGCCGGCGA CTGGGCCGAG
CATTCGCTGC GGGTACAGGT GATGCTGACC GGGCTCACCG ATCATGTCCG CGCGCTCGAA
TCCGATCATC GCGGCTATGT CCTATCGCGC AGCCGGGACA TCCGCGCCGA CTTCCGGAAA
CAGGTCGATG CGCTTCCGCC CGTGCTCGAC CGGCTGCAAT ATGAGGTGCG GGACAACCCC
GCCCAGTCGG CGCACATGGA GGAACTCCGC CGCGCCGTGC AGGCGAAGGT CGACTATGCG
CGCCAGGGCG TGTCGGCGGT CGACGCTGGC CGCCGCGACG AGGAGATCGC CCGGATGGGC
CTGGGCGAAG GCGCCCGCCG GATGGACGCC GCGCTCGCCG TCATCCACCG CATGGTCACC
GAGGAGGAAT GGCTGCTGGC GGACCGGCGC GCGACGACCG ACACGCTTGT CCTCGGCCTC
GGGCTGGTGC TGGTGGCGAC CCTGCTGCTC GTCCTGCTCA TCGCCGGCCT CGTCATCCGC
GACGCCAACC GGCGCGAGCG CGAGGTGATC GTCGCCCGCG ACGAGGCCGT CGCCGCCGAA
CAGGCGCTAC GCGAGGAGAT CGCCGCGCGC GCGCAGATGG AGGAGAAGAT CCTCCATCTC
CAGAAGATGG AATCGATCGG CCAGCTCACC GGCGGGATCG CCCATGATTT CAACAATATG
CTGGCAATCG TGATCGGCAG CCTCGACCTC GCCCGGCGGC GGCTGACCGG CGATCCGGAG
CGGCTGGCGC GCAACATCGA CAATGCCTTC GAAGGCGCCG AGCGCGCCGC CGCCCTCACC
TCCCGGCTGC TCGCCTTCTC GCGCCAGCAG CCGCTCGCCC CGATCACGCT CGACATCAAC
AAGCTCGTCT CGGGCATGTC GGAACTGCTG CAACGGACGC TGGGCGAGCC CTATCGGATC
GAGACGGTGC TGGCCGGCGG CCTGTGGCGC AGCTTCGCCG ATCCGGGCCA GCTCGAAAAC
GCGGTCGTCA ACCTGGCGGT CAACGCGCGC GACGCGATGC CGGGCGGCGG ACGGCTGACG
ATCGAGACGT CCAACGCCTA TCTCGACGAC GAATATGCCA AGACCCGGCC CGAGGTGACG
CCCGGCCAAT ATGTGATGAT CAGCATCACC GACACGGGCA GCGGCATGGC GCCCGAGGTG
CTCGCCAAGG CGTTCGACCC CTTCTTCACC ACCAAGCCGG TCGGCAAGGG CACCGGCCTG
GGGCTCAGCC AGATCTTCGG CTTCGTCAAG CAGACCGGCG GCCATGTCGC GATCTATTCG
GAGCTCGACC AGGGCACGAC GGTGAAGCTC TATCTGCCGC GCAGCTACGG CCTGGCGATC
GATCCCCGCA GCCGGCAGGC GATGGCCGAG ACCGAGGTGC CCCGTGCCCG GACCGGCGAG
ACGATCCTGG TCGTCGAGGA CGAGCAGCGC GTCCGCCACT TCTCGGTCGA TGCGCTGCGC
GACCTCGGCT ATGTCGTGAT TTCCGCCGCC AACGCGGCCG AGGCGCTCGA GGCGCTCACC
GCGCAGCCGA CGATCAGCAT GTTGTTCACC GACATCGTCA TGCCGGAGAT GAACGGCCGC
CAGCTCGCGG ACACGGCGCT CGAGCTGCGG CCCGGCCTGC CGATCCTGTT CACCACCGGC
TATACCCGCA ACGCCGTGAT CCACAACGGC ATGCTCGACG CGGGCGTCGC CTTCCTCGCC
AAGCCGTTCA GCCTGAGCCA GCTCGGCACC AAGGTGCGCG AGGTGCTCGA CGGCGGCGGC
GTCAACCGCC CGGCCTGA
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| Protein sequence | MLAGRRPPYL ALAGLLVAIL AAVAALFLTR AQSRAGDWAE HSLRVQVMLT GLTDHVRALE
SDHRGYVLSR SRDIRADFRK QVDALPPVLD RLQYEVRDNP AQSAHMEELR RAVQAKVDYA
RQGVSAVDAG RRDEEIARMG LGEGARRMDA ALAVIHRMVT EEEWLLADRR ATTDTLVLGL
GLVLVATLLL VLLIAGLVIR DANRREREVI VARDEAVAAE QALREEIAAR AQMEEKILHL
QKMESIGQLT GGIAHDFNNM LAIVIGSLDL ARRRLTGDPE RLARNIDNAF EGAERAAALT
SRLLAFSRQQ PLAPITLDIN KLVSGMSELL QRTLGEPYRI ETVLAGGLWR SFADPGQLEN
AVVNLAVNAR DAMPGGGRLT IETSNAYLDD EYAKTRPEVT PGQYVMISIT DTGSGMAPEV
LAKAFDPFFT TKPVGKGTGL GLSQIFGFVK QTGGHVAIYS ELDQGTTVKL YLPRSYGLAI
DPRSRQAMAE TEVPRARTGE TILVVEDEQR VRHFSVDALR DLGYVVISAA NAAEALEALT
AQPTISMLFT DIVMPEMNGR QLADTALELR PGLPILFTTG YTRNAVIHNG MLDAGVAFLA
KPFSLSQLGT KVREVLDGGG VNRPA
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