Gene Swit_4721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4721 
Symbol 
ID5198892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5189018 
End bp5189425 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content70% 
IMG OID640584276 
Productresponse regulator receiver protein 
Protein accessionYP_001265196 
Protein GI148557614 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.445626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCAG ACCTTACCCC ATCGGCCAGA ATCCTCATCG TCGAAGACAA TGTCGCCGTC 
GCGCGGTCGC TGGAGATCCT GCTGACCTAT CTCGGCCATC GCTGCGCCGC GACGGCCAGC
GCCGAGGAGG CGGAGCGCCT CGACCACCAG CTCTTCGATC TCGCGCTCGT CGACATCCTC
CTTCCTGGCG CAAGCGGCCT CGCCCTCGCC GACCGGATCG CGGCACGGCG TCCGGGCATC
GGGATCATCC TGATGACGGG CAGCCCGGCG CATCTCCACC ATCCCGTGGC CGGCTTCCGC
CGGGTGCTGC TCAAGCCGTT CCGCCCGCGC GAGCTGGAGG AGGCGATCGC CCACGCCTTG
CGGCAGCGCC GCCGCGTCGA GGAACGACGG CTCGCCCCGC TCAGATGA
 
Protein sequence
MTADLTPSAR ILIVEDNVAV ARSLEILLTY LGHRCAATAS AEEAERLDHQ LFDLALVDIL 
LPGASGLALA DRIAARRPGI GIILMTGSPA HLHHPVAGFR RVLLKPFRPR ELEEAIAHAL
RQRRRVEERR LAPLR