| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4720 |
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| Symbol | |
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| ID | 5198403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5188357 |
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| End bp | 5189025 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640584275 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001265195 |
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| Protein GI | 148557613 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.104323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATC CCACGTCCCC AGTGCCCCGC AGATCGGACT CGCCCTATCC GGGCCATGAG
CAGCTCGTGC TCAAGGCGAT GGGCGGGGGC CTGTGGGATT ATGACGTCGA TGCCGACATC
CTGTCGTGCA ACGATCGCTG GTACGCCATA TTGGGCCTCG ATCCCGCCCG GATGCCGATC
CGCGCGATCG CCGATTTCCA GCGCCACATC CACCCCGACG ACGTCGCGCA GGCGACGCTG
GTCGACGAGG CGGCGATCGC CGATCTGATC GACCATGACG ATCCCTACCG GATGGAGTTC
AGGATCATCC GCCCCAACGG GACGGTCGTG CGGGTCCGGT CGGTCGCCTC GATCATCCGC
GATCGGGAGA CCGGCCATGT CCGCGCGATC GGATGCATGA CGGAGCTCGA CGGGCCGGAT
CAGGAGGCCG GCGAAGCCTC CGCCGCGCCG GCCCCCGGAG GAGCGGGCCG GGGCGCATCG
GCGCTGCGAT CGAGGGAACG CGAATGCCTG GTCTGGCTGA GCCTGGGGAA GACCGCCTGG
GAAACCGCGG CGATCCTCGG CCTCAGCCAG CGCACGGTCG AATATCACCT CAACAATGCC
GTCGCCCGGC TGGGTGCCGC CAACAAGGTC CATGCGGCGG TCATCGCGAT CCGCGCCCAG
CTCATCTGA
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| Protein sequence | MSDPTSPVPR RSDSPYPGHE QLVLKAMGGG LWDYDVDADI LSCNDRWYAI LGLDPARMPI
RAIADFQRHI HPDDVAQATL VDEAAIADLI DHDDPYRMEF RIIRPNGTVV RVRSVASIIR
DRETGHVRAI GCMTELDGPD QEAGEASAAP APGGAGRGAS ALRSRERECL VWLSLGKTAW
ETAAILGLSQ RTVEYHLNNA VARLGAANKV HAAVIAIRAQ LI
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