Gene Swit_4719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4719 
Symbol 
ID5198890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5186874 
End bp5187941 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content72% 
IMG OID640584273 
ProductPpx/GppA phosphatase 
Protein accessionYP_001265194 
Protein GI148557612 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0584151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTGA CGATCATGGC GCACGGCCCC GATATGGTCG CGCCGCGCCC ACCGCGTGAA 
GGGGGGCGCC GCGCGCATTC CCCACCCCAT CATTTCCCCC CGCGCAGCAG CTATGCCGCG
CTCGATCTCG GCACCAACAA TTGCCGGCTG CTGATCGCGC GGCCAAGCGA GGACGGCTTC
GTCGTCGTCG ACGCCTTTTC GCGAATCGTC CGGCTCGGCG AGGGGCTGGC GGCGACCGGG
CGGCTGTCCG ACGCGGCGAT GGACCGGGCG GTCAGCGCGC TGTCGGTCTG CGCCGACAAG
CTGCGCCGCC GCCGCGTCTC GCTGGTCCGG TCGGTGGCGA CCGAGGCATG CCGCCGCGCC
GCCAACGGGC GCGAGTTCGT CCAGCGCGTC TATCGCGAGA CCGGCATCGC GCTCGAGATC
ATCAGCCCCG AGCAGGAGGC ACGGCTGGCG GTGCTCGGCT GCCACGCGCT GATCGAGCCC
GGCGAGGGCC AGGCGCTGGT GTTCGACATC GGCGGCGGCT CGACCGAGCT GATCCTGATC
GACGCCGACC AGAGCCCGCC GCGCGTGATC GACTGGTATT CGGCGCCCTG GGGCGTCGTC
TCGCTGTCGG AGACCGAGCC GCATGTCGGC GACAGCCGCG ACGGCCTGCT CGACAGCTAT
GCGCGGATGC GGTCGCGGGT CGCGGAAAGC TTCGCCCAGT TCGCCGCCAA GCTCGAACCC
GGCGCCCAGC CGGGCCGGCT GCTCGGCACC AGCGGCACCG TCACCACCCT CGCCAGCGTC
CATCTCGACC TGCCCAATTA CGACCGGCGG CTGATCGACG GCCTGGTCGT GCCGGTGACG
GCGATGCGCG ACATCAGCGC GCGGCTGGCG GGCATGAACG TCGACGAGCG CGCCGAGGTG
CCGTGCATCG GCCATGAGCG CGCCGACCTG GTGGTGGCGG GCTGCGCGAT CCTCGACGCG
ATCCTCGACA TGTGGCCGGC CGAACGGCTC GGCGTCGCCG ACCGCGGCAT TCGCGAGGGG
ATTCTCCGCT CGCTGATGGC GCGCGACAGG ACAAGGATGC TGATGTGA
 
Protein sequence
MRLTIMAHGP DMVAPRPPRE GGRRAHSPPH HFPPRSSYAA LDLGTNNCRL LIARPSEDGF 
VVVDAFSRIV RLGEGLAATG RLSDAAMDRA VSALSVCADK LRRRRVSLVR SVATEACRRA
ANGREFVQRV YRETGIALEI ISPEQEARLA VLGCHALIEP GEGQALVFDI GGGSTELILI
DADQSPPRVI DWYSAPWGVV SLSETEPHVG DSRDGLLDSY ARMRSRVAES FAQFAAKLEP
GAQPGRLLGT SGTVTTLASV HLDLPNYDRR LIDGLVVPVT AMRDISARLA GMNVDERAEV
PCIGHERADL VVAGCAILDA ILDMWPAERL GVADRGIREG ILRSLMARDR TRMLM