Gene Swit_4717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4717 
Symbol 
ID5196666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5185372 
End bp5186070 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content68% 
IMG OID640584271 
Productribonuclease T2 
Protein accessionYP_001265192 
Protein GI148557610 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG3719] Ribonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0786884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATCG GTCTCCCCGT CCTGCTCGCC GCCCTGCTGG TGACCCCCGC CTGCGCGAAG 
AAGGCGCCGA GCTGCGAGGT TCCCGCGACG CTGCCGCGGC CGATGCTCGA GGGGCCGAGC
GTGGACCAGC CGCGCCGGCT GCTGCCGACC GGCGGCTACA CGCTCGCGGT GAGCTGGTCG
CCGCAATATT GTATAGACAA AAGCAGCAGC CCGCAGGACC ATATCCGATG CGGCGGCGCC
AACAGCTTCG GCTTCACCCT CCATGGCCTG TGGCCCGACG GGGAAGGGGC GCTGTGGCCG
CAATATTGCA AGCCGACCCG GCTGGTGCCC GACAAGGTGA TCCGAGAGCA TCTGTGCAGC
ACGCCCTCGC CGCAGCTCAT CCAGCATGAG TGGGAGAAGC ACGGCACCTG CATGTCGAAG
ACGCCCGCCG ACTATTTCGC GAAGAGCGGC AAGCTGTTCG CCGAGCTCGC CTTCCCCGAC
ATGAAGGCGC TGAGCGGGCG CACGATGACT GCCGCCGATT TCCAGCGGAA GTTCGCCGAC
GCCAATCCCG GCATGCGGCC CGAGGAGATG CGCCTGAACG TCGGCAAGTC GGGCTGGATG
GAGGAGGTGT GGATCTGCCT CGACAAGCAG TTCCACCGCC GCGCCTGCCC CGCCCATCAG
GGCGGCGCGG CGCCCGGGCA GGTCGTGCGG ATTCGGTAA
 
Protein sequence
MRIGLPVLLA ALLVTPACAK KAPSCEVPAT LPRPMLEGPS VDQPRRLLPT GGYTLAVSWS 
PQYCIDKSSS PQDHIRCGGA NSFGFTLHGL WPDGEGALWP QYCKPTRLVP DKVIREHLCS
TPSPQLIQHE WEKHGTCMSK TPADYFAKSG KLFAELAFPD MKALSGRTMT AADFQRKFAD
ANPGMRPEEM RLNVGKSGWM EEVWICLDKQ FHRRACPAHQ GGAAPGQVVR IR