Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4717 |
Symbol | |
ID | 5196666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 5185372 |
End bp | 5186070 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640584271 |
Product | ribonuclease T2 |
Protein accession | YP_001265192 |
Protein GI | 148557610 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG3719] Ribonuclease I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0786884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATCG GTCTCCCCGT CCTGCTCGCC GCCCTGCTGG TGACCCCCGC CTGCGCGAAG AAGGCGCCGA GCTGCGAGGT TCCCGCGACG CTGCCGCGGC CGATGCTCGA GGGGCCGAGC GTGGACCAGC CGCGCCGGCT GCTGCCGACC GGCGGCTACA CGCTCGCGGT GAGCTGGTCG CCGCAATATT GTATAGACAA AAGCAGCAGC CCGCAGGACC ATATCCGATG CGGCGGCGCC AACAGCTTCG GCTTCACCCT CCATGGCCTG TGGCCCGACG GGGAAGGGGC GCTGTGGCCG CAATATTGCA AGCCGACCCG GCTGGTGCCC GACAAGGTGA TCCGAGAGCA TCTGTGCAGC ACGCCCTCGC CGCAGCTCAT CCAGCATGAG TGGGAGAAGC ACGGCACCTG CATGTCGAAG ACGCCCGCCG ACTATTTCGC GAAGAGCGGC AAGCTGTTCG CCGAGCTCGC CTTCCCCGAC ATGAAGGCGC TGAGCGGGCG CACGATGACT GCCGCCGATT TCCAGCGGAA GTTCGCCGAC GCCAATCCCG GCATGCGGCC CGAGGAGATG CGCCTGAACG TCGGCAAGTC GGGCTGGATG GAGGAGGTGT GGATCTGCCT CGACAAGCAG TTCCACCGCC GCGCCTGCCC CGCCCATCAG GGCGGCGCGG CGCCCGGGCA GGTCGTGCGG ATTCGGTAA
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Protein sequence | MRIGLPVLLA ALLVTPACAK KAPSCEVPAT LPRPMLEGPS VDQPRRLLPT GGYTLAVSWS PQYCIDKSSS PQDHIRCGGA NSFGFTLHGL WPDGEGALWP QYCKPTRLVP DKVIREHLCS TPSPQLIQHE WEKHGTCMSK TPADYFAKSG KLFAELAFPD MKALSGRTMT AADFQRKFAD ANPGMRPEEM RLNVGKSGWM EEVWICLDKQ FHRRACPAHQ GGAAPGQVVR IR
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