| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4703 |
|---|
| Symbol | |
|---|
| ID | 5199097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 5173893 |
|---|
| End bp | 5174357 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640584257 |
|---|
| Product | cupin 2 domain-containing protein |
|---|
| Protein accession | YP_001265178 |
|---|
| Protein GI | 148557596 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3837] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.835831 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCAGGA TCGACATCGA CGCCGTGCCC GTCAGCAGCG GCTGCAGCTA TCCGCATCCC
TTCAAGGACA TCTGCCTGGG CGCCACCTGG CGCAAGCTGG GCGATGCGGC GGGGCTCGAC
GATTTCGGAG TCAACCTCGT CCGCCTGCCG CCGGGCCGAT GGTCGAGCCA GCGCCACTGG
CACAGCGTCG AGGACGAGTT CGTCATGATG CTGGAGGGCG AGGTCGTGGC GGTCGAGGAC
GATGGCGACC ATGTCCTGCG CGCCGGCGAC TGCATCGGCT GGAAGGCCGG CGTGGCCAAC
GGCCATTGCC TGCAGAACCG GAGCGATCGC GACGCCGTCT ATCTGGAGAT CGGATCGCGG
CGGCCGTCGA CCGACGCCTG CCACTATCCC GACATCGACA TGGACGCGCG GCCGGGCGAG
TCCTTCTACC GCCATCTCGA CGGGACGCCC TATCCGAAGG AATGA
|
|---|
| Protein sequence | MPRIDIDAVP VSSGCSYPHP FKDICLGATW RKLGDAAGLD DFGVNLVRLP PGRWSSQRHW
HSVEDEFVMM LEGEVVAVED DGDHVLRAGD CIGWKAGVAN GHCLQNRSDR DAVYLEIGSR
RPSTDACHYP DIDMDARPGE SFYRHLDGTP YPKE
|
|---|
| |