| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4696 |
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| Symbol | |
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| ID | 5199339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 5166054 |
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| End bp | 5168345 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640584250 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001265171 |
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| Protein GI | 148557589 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.383832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.747647 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCT CCACTGTCCG GCGCGCCGCG CTGATGTTCG GCGTCGCCTT CGCCGCCCTG
GCCGCCGCGC CGTCCTTCGC CCAGGCCGCG CCCGCCGACG AAGCCTCGTC GGGCGAAGGC
CTCGACGAGA TCATCGTCAC CGCGGAGCGC CGCGAGGAGA ATCTGCAGCG CGTCCCCGTC
TCGGTCGGCG TCGTCAACGG CGACAATATC CGCGCCTATA CCAGCGGCGG CGACGACACG
CTGCTCGCCC TCTCCGGCCG CGTGCCCAGC CTCTATGCGG AGACCACCAC GGGCCGCATC
TTCCCGCGCT TCTACATCCG CGGCCTCGGC AATATCGACT TCTACCTCGG CGCGTCGCAG
CCGGTCTCGA TCATCCAGGA CGACATCGTC CTCGAGCATG TCGTGCTCAA GTCGAACCCG
GTCTACGACA CCCAGCAGGT CGAGGTGTTG CGCGGCCCGC AAGGCTCGCT GTTCGGCCGC
AACACCACCG CCGGCATCAT CAAGTTCGAC AGCATCAAGC CGTCGAACGC GTTCGAGGCG
CGCGCCTCGG CCAGCTATGG CAGCTACAAC ACGATCACGG TCGACGCCGG TGTCGGCGGC
CCGATCGTCG AGGACAAGGT CGCCGTCCGC CTGTCGGGCC TGTACCAGCA CCGCGACGAC
TGGGTCGACA ATGTCTATGC CGGCCCGAGC GCCGACGGCA CCGTCACCCC CAAGAAGAAC
GCGATGGGCG GCTTCAACGA CCGCAACTTC CGCGCCCAGG TGCTGCTGAC CCCGACCGAG
ACCTTCTCGA TCCTCGCCTC GGGCCATCTG CGCGACTATG ACGGCACCTC GACGCTGTTC
CTGCGCAACG CGATCACCAA GGGCTCGAAC AAGGTCGACG TGCCGCGCGA CCAGGTCGCC
TATGACGAGG CGCAGGACAA TCCGCAGGCC TACAAGACCT ATGGCGCGTC GGTGAAGGCG
ACGCTCGACC TGGGCGGCGT GTCGCTGACC TCGATCACCG GCTATGAGAC CACCTCGGGC
TACAGCCGCG GCGACACCGA CGGCGGCGCG GCGGCCAATT ATGGCGGCGT CGGCTTCGGC
CAGTCGATGG GCCAGGTCCG CGACCTCGAC CAATATACCC AGGAGCTTCG CCTCGCCAGC
ACCGGCAACG GCGCGTTCAA GTGGCAGGTC GGCGGCTTCT ACTTCGACAG CCGCGACAAC
ACCGACTTCT ACCAGCGCGC CTATTTCCTC CAGGGCGCCG CCCGCAACCC GAACAACTGG
GTGCGGCTGC ACAACGTCAA CACCTCCTGG GCGCTGTTCG GCCAGGCCAG CTATCAGGTC
ACGCCCGAGC TGACCCTGAC CGCCGGCGCG CGCCAGACCA AGGACACCAA GAAGACCCGG
CTGGTGAAGA CCGCCGACAC CGCGGCCGGC GCGGTCACCT ATACCGGCCG CCGCTACGTC
CGCCTGTCGG ACTCGACGCC GAGCTGGGAC CTGAGCGCGC TCTACCAGGT CAATCCCGAC
CTGAGCGTCT ATGCCCGCGT CGCCCGCGGC TTCCGCGGCC CGACCATCCA GGGCCGCTCG
GCGGTGTTCA ACGCCGACTT CACCACCGCG GATTCGGAGA AGATCCTGTC CTGGGAAGCC
GGCTTCAAGA GCAGCCTGTT CGACAACAAG CTGCGCCTGA ACGCGACCGC CTTCTACTAT
ACGGTCAAGG ACATCCAGCT CAACGGCAAC GACTCGAACG GCAACGGCGT GCTGTTCAAC
GCCGACAAGG CGGAGGCCTA TGGCTTCGAG GCCGACGCCG AGTTCCGTCC GGTCCGCAAC
CTCGCCATCT CGGCCGGCGT CAGCCTGCTG CACAGCGAGA TCAAGGACAA GCGCGTCTAT
GCGCAGGTCT GCGCGCTCAA CGGCGTGGTG GTCTGCACGG TCGAGAATCC GACGATCAAG
GTCGGCGCCA ACACCTTCGC GCAGATCGAC GGCCAGCCGC TGCCGAACGC GCCGAAGTAC
AACCTGAACC TCGCCGCCCG CTACGACATC CCGCTGACCG ACAGCGGCAA GCTGTTCGTC
TCGACCGACT GGAACCTGCA GGGCTACACC AACTTCGTCC TCTACAAGAC GAAGGAGTTC
ACCTCGAAGG GCAACTTCGA AGGCGGGCTG AAGCTCGGCT ACACCGGCAA TGACGGCCAG
TATGAGATCG CGCTGTTCGC GCGCAACATC ACCAATGAGA AGAACCTCAA GGGCGTGATC
GAGAACTACA TGGCCGCCGT CTACAACGAG CCGCGCATCA TCGGCGTCTC GTTCAGCGGC
AAGCTGAACT AA
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| Protein sequence | MTVSTVRRAA LMFGVAFAAL AAAPSFAQAA PADEASSGEG LDEIIVTAER REENLQRVPV
SVGVVNGDNI RAYTSGGDDT LLALSGRVPS LYAETTTGRI FPRFYIRGLG NIDFYLGASQ
PVSIIQDDIV LEHVVLKSNP VYDTQQVEVL RGPQGSLFGR NTTAGIIKFD SIKPSNAFEA
RASASYGSYN TITVDAGVGG PIVEDKVAVR LSGLYQHRDD WVDNVYAGPS ADGTVTPKKN
AMGGFNDRNF RAQVLLTPTE TFSILASGHL RDYDGTSTLF LRNAITKGSN KVDVPRDQVA
YDEAQDNPQA YKTYGASVKA TLDLGGVSLT SITGYETTSG YSRGDTDGGA AANYGGVGFG
QSMGQVRDLD QYTQELRLAS TGNGAFKWQV GGFYFDSRDN TDFYQRAYFL QGAARNPNNW
VRLHNVNTSW ALFGQASYQV TPELTLTAGA RQTKDTKKTR LVKTADTAAG AVTYTGRRYV
RLSDSTPSWD LSALYQVNPD LSVYARVARG FRGPTIQGRS AVFNADFTTA DSEKILSWEA
GFKSSLFDNK LRLNATAFYY TVKDIQLNGN DSNGNGVLFN ADKAEAYGFE ADAEFRPVRN
LAISAGVSLL HSEIKDKRVY AQVCALNGVV VCTVENPTIK VGANTFAQID GQPLPNAPKY
NLNLAARYDI PLTDSGKLFV STDWNLQGYT NFVLYKTKEF TSKGNFEGGL KLGYTGNDGQ
YEIALFARNI TNEKNLKGVI ENYMAAVYNE PRIIGVSFSG KLN
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