Gene Swit_4691 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4691 
Symbol 
ID5196376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5159424 
End bp5160017 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content73% 
IMG OID640584245 
Producthypothetical protein 
Protein accessionYP_001265166 
Protein GI148557584 
COG category[S] Function unknown 
COG ID[COG5389] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.165026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.387608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACG CGATGAGCGA AACCGGCAAG ACACGATCCC CGACGAAGGC CCCGGCGAAG 
AAGCCTGCCG CCATGGTGCG CGAACCCCGT CCGCGCGGCG GCGCGGCGCG CGCGGTGGCG
GACATGGTGC CCGATATCGG CCGCGCCGCC TTCCGCCGCT TCGGCTTCGT CCAGAGCTCG
GTGGTCAGCC GCTGGGCGGA GATCGTCGGC GAGCGCTATG CCCGCGTCTC GATCCCCGAA
TCGATCCGCT TCCCGCAGGG GCGCCGCGCC GACGGGGTGC TGACCCTGAC GGTCGAGGGA
TCGCACGGCA CCATGCTCCA GCATGTCGTG CCGACGATCA TCGAGCGGGT GAACCGCTTC
TTCGGCTATT CGGCGGTCGC CCGGATCGCG ATCAAGCCCG GCGCCTGCGC CGCGCCGCAG
CCGCCGCGCG GCCGGGTGGC GCCGCCGTCG CTCCGTCCGG TGCCGGTCGA GCTGGGCGAG
AGCCTGCGCA CGGTCGGCGA TCCCGAGCTG CGCGCCTGCC TCGAATCGCT GGCCGGCGCG
CTCGCCGCGA CCAGCGGACC TCCCGTCATC GCATCCGGAG ACAGCAACCG GTGA
 
Protein sequence
MKHAMSETGK TRSPTKAPAK KPAAMVREPR PRGGAARAVA DMVPDIGRAA FRRFGFVQSS 
VVSRWAEIVG ERYARVSIPE SIRFPQGRRA DGVLTLTVEG SHGTMLQHVV PTIIERVNRF
FGYSAVARIA IKPGACAAPQ PPRGRVAPPS LRPVPVELGE SLRTVGDPEL RACLESLAGA
LAATSGPPVI ASGDSNR