Gene Swit_4689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4689 
Symbol 
ID5196374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5157472 
End bp5158365 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content74% 
IMG OID640584243 
ProductNUDIX hydrolase 
Protein accessionYP_001265164 
Protein GI148557582 
COG category[L] Replication, recombination and repair 
COG ID[COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0276951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.161392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGCT TCCCCGTCCC GGGCTTCACC GGATCGCCGC TCGCCCGGGT CGACATCGAA 
CGCGACCGGC CCGCCTGGTT CGAGGAGCAG CGCGCCGATC CCGCCGCCCG GCTGCTGCGG
CTCGACGGGC TGAAGCCGGT GCTCGACGAG GACGGGCGGC TGAGTTGGGG TCCGCTGTCG
GAGGCGCCGG CCGGCGTCGG ACTCGCCCTG CTCGGCCTGA TCGACGGCGC GCCGCGCTTC
GTCGCGCTGA CCGCAAGCCC GGCCGAGGGC GACCAGCGCG GCGAGTCGAT CGCGATCGCG
CGGACGATGA CCGAGCCCGG CGCCAGCGCG ACCTATGCCG CGGCCCGCTC GCTGGTCGAC
TGGCATGCGC GCCACCGCTT CTGCGCCAAT TGCGGCCGGC CGACCGGCGT CGCGCGGTCG
GGCTGGGCGC GCTTCTGCCT GGCGGTCGAG GGCGGCTGCG GCGCCGAGCA TTTCCCGCGC
ACCGACCCGG TGGTGATCAT GCTGGCCGAG CATGAGGGCC GCGTCCTGCT CGGCCGCAAC
GTCCGCGCGC CCAATGGCTT CTATTCGGCG CTGGCCGGCT TCCTGGAGGT GGGCGAGTCG
ATCGAGGAGG CCGTCGCGCG CGAACTGAAC GAGGAGGCGG ACGTCGTCGT CACCGGGGTC
CGCTACGTCA CCAGCCAGCC CTGGCCCTTC CCCTCGCAAC TGATGATCGC CTGCATCGCC
ACGGTCGAGA GCGACGCGCT GACCCTCGAC ACCAACGAAC TGGGCGACGC GCTCTGGGCG
ACGAGGGACG AGGTCCGCGC GGCGCTGGCC GGCGACCCCG GCACCGCCTT CCGCGTCCCC
TTCCCGATCG CGATCGCCCA TACGCTGCTC ACCGCCTGGG TGAACGGGGC GTAG
 
Protein sequence
MASFPVPGFT GSPLARVDIE RDRPAWFEEQ RADPAARLLR LDGLKPVLDE DGRLSWGPLS 
EAPAGVGLAL LGLIDGAPRF VALTASPAEG DQRGESIAIA RTMTEPGASA TYAAARSLVD
WHARHRFCAN CGRPTGVARS GWARFCLAVE GGCGAEHFPR TDPVVIMLAE HEGRVLLGRN
VRAPNGFYSA LAGFLEVGES IEEAVARELN EEADVVVTGV RYVTSQPWPF PSQLMIACIA
TVESDALTLD TNELGDALWA TRDEVRAALA GDPGTAFRVP FPIAIAHTLL TAWVNGA