Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4689 |
Symbol | |
ID | 5196374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 5157472 |
End bp | 5158365 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640584243 |
Product | NUDIX hydrolase |
Protein accession | YP_001265164 |
Protein GI | 148557582 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0276951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.161392 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGCT TCCCCGTCCC GGGCTTCACC GGATCGCCGC TCGCCCGGGT CGACATCGAA CGCGACCGGC CCGCCTGGTT CGAGGAGCAG CGCGCCGATC CCGCCGCCCG GCTGCTGCGG CTCGACGGGC TGAAGCCGGT GCTCGACGAG GACGGGCGGC TGAGTTGGGG TCCGCTGTCG GAGGCGCCGG CCGGCGTCGG ACTCGCCCTG CTCGGCCTGA TCGACGGCGC GCCGCGCTTC GTCGCGCTGA CCGCAAGCCC GGCCGAGGGC GACCAGCGCG GCGAGTCGAT CGCGATCGCG CGGACGATGA CCGAGCCCGG CGCCAGCGCG ACCTATGCCG CGGCCCGCTC GCTGGTCGAC TGGCATGCGC GCCACCGCTT CTGCGCCAAT TGCGGCCGGC CGACCGGCGT CGCGCGGTCG GGCTGGGCGC GCTTCTGCCT GGCGGTCGAG GGCGGCTGCG GCGCCGAGCA TTTCCCGCGC ACCGACCCGG TGGTGATCAT GCTGGCCGAG CATGAGGGCC GCGTCCTGCT CGGCCGCAAC GTCCGCGCGC CCAATGGCTT CTATTCGGCG CTGGCCGGCT TCCTGGAGGT GGGCGAGTCG ATCGAGGAGG CCGTCGCGCG CGAACTGAAC GAGGAGGCGG ACGTCGTCGT CACCGGGGTC CGCTACGTCA CCAGCCAGCC CTGGCCCTTC CCCTCGCAAC TGATGATCGC CTGCATCGCC ACGGTCGAGA GCGACGCGCT GACCCTCGAC ACCAACGAAC TGGGCGACGC GCTCTGGGCG ACGAGGGACG AGGTCCGCGC GGCGCTGGCC GGCGACCCCG GCACCGCCTT CCGCGTCCCC TTCCCGATCG CGATCGCCCA TACGCTGCTC ACCGCCTGGG TGAACGGGGC GTAG
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Protein sequence | MASFPVPGFT GSPLARVDIE RDRPAWFEEQ RADPAARLLR LDGLKPVLDE DGRLSWGPLS EAPAGVGLAL LGLIDGAPRF VALTASPAEG DQRGESIAIA RTMTEPGASA TYAAARSLVD WHARHRFCAN CGRPTGVARS GWARFCLAVE GGCGAEHFPR TDPVVIMLAE HEGRVLLGRN VRAPNGFYSA LAGFLEVGES IEEAVARELN EEADVVVTGV RYVTSQPWPF PSQLMIACIA TVESDALTLD TNELGDALWA TRDEVRAALA GDPGTAFRVP FPIAIAHTLL TAWVNGA
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