Gene Swit_4687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4687 
Symbol 
ID5198422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5155669 
End bp5156298 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content70% 
IMG OID640584241 
Productcytochrome c, class I 
Protein accessionYP_001265162 
Protein GI148557580 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0285175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.266621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATC GCGCGAACAC TATTGCCGGC TGGGCGCTGG CTGGCGGCAT TGCCGCATTG 
GGCCTTTCGA TCCTCAGCGG CGAATATTTC AAGGCCGAGC GTCCGGAAAA GATGGGCTAT
GTGGTCGAGG GCGTCGAGGA AGAAGGCGAC GCCGGCGCTG CCGCCGCGGC CGACAAGCCG
ATCGCCTTCT ACCTCGCCAG CGCCGATCCG GCGAAGGGCG CCGACGTCTT CAAGAAGTGC
GCCGCCTGCC ACAATGCCGC GAACGGCGGC CCGAATGCGC TCGGCCCGAA TCTGTGGGGC
GTCCTTGGCG AGGGCGTCGG CCAGGGCGCG CACGGCTTCG CCTTCTCCGA TGCGCTCAAG
TCGAAGGGCG GCACCTGGGA CTGGCAGAAT CTCAGCGACT GGCTGAAGAG CCCGAAGGCG
TTCGCGCCGG GCACCAAGAT GACCTTCGCG GGCCTCTCCA AGCCCGAGGA TCGCGCCAAC
GTCATCGCCT ATCTCAACCA GCAGAGCAAT TCGCCGCGGC CGATGCCGGC GGTGCCCGCC
GAAGCGGCGG CCCCGGCGGC CGAAGGCGGC GCGGCCGACA ATGCCGCGGC CCCGGCCGAG
GGCGGCAACG AGGCGGCGCC CGCCAAGTAA
 
Protein sequence
MDDRANTIAG WALAGGIAAL GLSILSGEYF KAERPEKMGY VVEGVEEEGD AGAAAAADKP 
IAFYLASADP AKGADVFKKC AACHNAANGG PNALGPNLWG VLGEGVGQGA HGFAFSDALK
SKGGTWDWQN LSDWLKSPKA FAPGTKMTFA GLSKPEDRAN VIAYLNQQSN SPRPMPAVPA
EAAAPAAEGG AADNAAAPAE GGNEAAPAK