| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4685 |
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| Symbol | |
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| ID | 5198420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 5152406 |
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| End bp | 5153983 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640584239 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_001265160 |
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| Protein GI | 148557578 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.436149 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAGG TACTGATTTC CGACAAGATG GACCCGCTCG CCGCGCAGAT CTTCCGCAAC
CGCGGGATCG AGGTCGATGA GATCACCGGC AAGACCAAGG ACGAGCTGAT CGCGATGATC
GGCCAGTATG ACGGCCTCGC CATCCGTTCG GCGACCAAGG TCACCAAGGA CGTCCTCGCC
GCCGCGACCA ATCTCAAGGT CGTCGGCCGC GCCGGCATCG GCGTCGACAA TGTCGACATC
CCCGCCGCCT CGGCCAAGGG CGTGGTGGTG ATGAACACCC CGTTCGGCAA CTCGATCACC
ACCGCCGAGC ATGCGATCGC GCTGATGTTC GCCCTCGCCC GCGACCTGCC CGAGGCCGAC
AAGTCGACCC AGGCCGGCAA GTGGGAGAAG AACCGCTTCA TGGGCGTCGA GGTGACCAAC
AAGGTCCTCG GCCTGATCGG CGCCGGCAAT ATCGGCTCGA TCGTCGCCGA CCGTGCGATC
GGCCTGAAGA TGAAGGTGGT CGCCTATGAT CCCTTCCTGA CCCCCGAGCG CGCCGTCGAG
ATGGGCGTCG AGAAGGTCAA TCTCGACGAC CTGCTCGCCC GCGCCGACTT CATCACGCTG
CACACGCCGC TGACCGATTC GACCAAGAAC ATCCTGTCGA AGGAGAATCT GGCGAAGACC
AAGAAGGGCG TGCGCATCGT CAACTGCGCG CGCGGCGGCC TGATCGACGA GGCGGCGCTC
AAGGAAGCGC TCGACAGCGG CCATGTCGCG GGTGCCGCGC TCGACGTTTT CGTCACCGAG
CCGGCGACCG AGTCGCCGCT GTTCGGCACC CCCGGCTTCA TCTCGACCCC GCACCTCGGC
GCCTCGACCA ACGAGGCGCA GGTCAACGTC GCGATCCAGG TCGCCGAGCA GATGGCCGAC
TTCCTGCTGT CGGGCGGCGT CACCAATGCG CTCAACATGC CGTCGCTGTC GGCCGAGGAA
GCGCCGAAGC TGAAGCCCTA CATGGCGCTG GCCGAGCATC TCGGCGCGCT GGTCGGCCAG
CTCGAGGGCG ACGCGATCAA GGCGGTCGCG ATCGAGGTCG AGGGCGCCGC CGCCGAGCTC
AACCAGAAGC CGATCACCGG CGCGGTGCTC GCCGGGCTGA TGGGCGTCTA TTCGGACACG
GTGAACATGG TCAACGCGCC CTTCCTGGCG AAGGAACGCG GCCTCGACCT GCGCGAGGTG
CGCCATGATC GCGAGGGCGA CTATTCGACC CTGGTCCGCG TCACCGTCAC CACCGCCGAG
GGCGCCAAGT CGGTCGCGGG CACGCTGTTC GCCAATGCCG AGCCGCGCCT CGTCGAGATC
TACGGCGTCA AGGTCGAGGC CGACCTGGGC GGCACGATGC TCTACATCGT CAACGTCGAC
GCGCCGGGCT TCATCGGCCG CCTCGGCTCG ACCCTGGGCG AGGCGAACGT CAACATCGGC
ACCTTCCACC TCGGCCGCCG CTCGGCCGGC GGCGAGGCGG TGCTGCTGCT GTCGGTCGAC
ACCCCCGTCG ACGACGCGCT CAAGGCGAAG ATCGCCCAGC TCCCCGGCGT GAAGACCGCC
AAGGCGCTGA GCTTCTAA
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| Protein sequence | MPKVLISDKM DPLAAQIFRN RGIEVDEITG KTKDELIAMI GQYDGLAIRS ATKVTKDVLA
AATNLKVVGR AGIGVDNVDI PAASAKGVVV MNTPFGNSIT TAEHAIALMF ALARDLPEAD
KSTQAGKWEK NRFMGVEVTN KVLGLIGAGN IGSIVADRAI GLKMKVVAYD PFLTPERAVE
MGVEKVNLDD LLARADFITL HTPLTDSTKN ILSKENLAKT KKGVRIVNCA RGGLIDEAAL
KEALDSGHVA GAALDVFVTE PATESPLFGT PGFISTPHLG ASTNEAQVNV AIQVAEQMAD
FLLSGGVTNA LNMPSLSAEE APKLKPYMAL AEHLGALVGQ LEGDAIKAVA IEVEGAAAEL
NQKPITGAVL AGLMGVYSDT VNMVNAPFLA KERGLDLREV RHDREGDYST LVRVTVTTAE
GAKSVAGTLF ANAEPRLVEI YGVKVEADLG GTMLYIVNVD APGFIGRLGS TLGEANVNIG
TFHLGRRSAG GEAVLLLSVD TPVDDALKAK IAQLPGVKTA KALSF
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