Gene Swit_4674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4674 
Symbol 
ID5200889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5141448 
End bp5142194 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content73% 
IMG OID640584228 
Producthypothetical protein 
Protein accessionYP_001265149 
Protein GI148557567 
COG category[S] Function unknown 
COG ID[COG3332] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0226025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.760363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGTCG TCGCCCTCGC CTGGAACGCC CATCCGCGCT GGCGGCTGGT GCTGGCGGGC 
AATCGCGACG AATATCATGG CCGCCCCGCC GCCCCGCTCG CCCGCTGGGA GGACCGGCCC
GCGCTGATCG CCGGGCGGGA CCTGCAATCG GGCGGCACCT GGCTCGGCGT CTCAGAAGCG
GGCCGCTGCG TCGTCGTCAC CAATCTGCGC GGCTTCGGCC TGCCCGAGCC CGGCCGCCCC
TCGCGCGGGG CGCTGGTCAC CGGCCTGCTC GACGGCGACG ATCCGGAGAG CGTCGCGATC
GACGCCTATA ACCCGGTCAA CCTGATCGCG CTCGACCGCG AGCGGGCGCA TTTCCTGAGC
AACCGCCCCG AACCGCAGCG CACCGCGCTC GCCCCCGGCC TCTACGGCCT GTCCAACGGC
CGGCTCGACG AGCCCTGGCC CAAGACTATG CGGCTCAAGT CGGCACTGCT CGACTGGCTG
ACCGGCCCGG CCGACACGCC CGAGCGGCTG TTCGACCCGC TGCGCGAGGA ACGCCTGCCC
GCCATCGGCC TCGACCCCGC GACGCCGTCG GACGTGCCGC GCGAACCGAA CCACAGCCCG
ATCTTCATCC TCGACCCGGT CTACGGCACG CGCTGCAGCT CGGTCGTCGC GATCGACCGC
GAGGGCCAGG GCCTGTTCCT CGAACGGCGC TTCGCGGCCG ATGGGACGAC GACGGGGGAG
ACCCGCCTCA CCTTCACCTG GCCCTGA
 
Protein sequence
MCVVALAWNA HPRWRLVLAG NRDEYHGRPA APLARWEDRP ALIAGRDLQS GGTWLGVSEA 
GRCVVVTNLR GFGLPEPGRP SRGALVTGLL DGDDPESVAI DAYNPVNLIA LDRERAHFLS
NRPEPQRTAL APGLYGLSNG RLDEPWPKTM RLKSALLDWL TGPADTPERL FDPLREERLP
AIGLDPATPS DVPREPNHSP IFILDPVYGT RCSSVVAIDR EGQGLFLERR FAADGTTTGE
TRLTFTWP