Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4674 |
Symbol | |
ID | 5200889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 5141448 |
End bp | 5142194 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640584228 |
Product | hypothetical protein |
Protein accession | YP_001265149 |
Protein GI | 148557567 |
COG category | [S] Function unknown |
COG ID | [COG3332] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0226025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.760363 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCGTCG TCGCCCTCGC CTGGAACGCC CATCCGCGCT GGCGGCTGGT GCTGGCGGGC AATCGCGACG AATATCATGG CCGCCCCGCC GCCCCGCTCG CCCGCTGGGA GGACCGGCCC GCGCTGATCG CCGGGCGGGA CCTGCAATCG GGCGGCACCT GGCTCGGCGT CTCAGAAGCG GGCCGCTGCG TCGTCGTCAC CAATCTGCGC GGCTTCGGCC TGCCCGAGCC CGGCCGCCCC TCGCGCGGGG CGCTGGTCAC CGGCCTGCTC GACGGCGACG ATCCGGAGAG CGTCGCGATC GACGCCTATA ACCCGGTCAA CCTGATCGCG CTCGACCGCG AGCGGGCGCA TTTCCTGAGC AACCGCCCCG AACCGCAGCG CACCGCGCTC GCCCCCGGCC TCTACGGCCT GTCCAACGGC CGGCTCGACG AGCCCTGGCC CAAGACTATG CGGCTCAAGT CGGCACTGCT CGACTGGCTG ACCGGCCCGG CCGACACGCC CGAGCGGCTG TTCGACCCGC TGCGCGAGGA ACGCCTGCCC GCCATCGGCC TCGACCCCGC GACGCCGTCG GACGTGCCGC GCGAACCGAA CCACAGCCCG ATCTTCATCC TCGACCCGGT CTACGGCACG CGCTGCAGCT CGGTCGTCGC GATCGACCGC GAGGGCCAGG GCCTGTTCCT CGAACGGCGC TTCGCGGCCG ATGGGACGAC GACGGGGGAG ACCCGCCTCA CCTTCACCTG GCCCTGA
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Protein sequence | MCVVALAWNA HPRWRLVLAG NRDEYHGRPA APLARWEDRP ALIAGRDLQS GGTWLGVSEA GRCVVVTNLR GFGLPEPGRP SRGALVTGLL DGDDPESVAI DAYNPVNLIA LDRERAHFLS NRPEPQRTAL APGLYGLSNG RLDEPWPKTM RLKSALLDWL TGPADTPERL FDPLREERLP AIGLDPATPS DVPREPNHSP IFILDPVYGT RCSSVVAIDR EGQGLFLERR FAADGTTTGE TRLTFTWP
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