| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4672 |
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| Symbol | |
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| ID | 5198657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5139463 |
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| End bp | 5140986 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640584226 |
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| Product | fumarase |
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| Protein accession | YP_001265147 |
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| Protein GI | 148557565 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0151007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.629032 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCA TCATCAAGGA AGCCGACCTG ATCGAGAGCA TCGCCGATGC CCTCCAGTAC
ATCAGCTATT ATCACCCGAT GGATTACATC AAGGCGCTGG GCGCGGCCTA TGAGGCCGAG
CAGGGGCCGG CCGCCAAGGA CGCGATCGCG CAGATCCTGA CCAACAGCCG GATGTGCGCC
GAGGGGCATC GGCCGATCTG CCAGGATACC GGCATCGTCA CCGTCTTCAT CAAATGGGGC
CAGCAGTGCA TGCTGGACTC GGAGAAGAGC CTGCAGGAGG TCGTCGACGA GGGCGTCCGC
CGTGCCTATC TCCACCCCGA GAACCGGCTG CGCGCCTCGA TCCTGCGCGA TCCCGCCTTC
AGCCGGGTCA ACACCAAGGA CAACACGCCG TCGGTGATGA ACGTCGAGAT GGTGCCCGGC
CACCATGTCG AGGTCGCGGT CGCGGCCAAG GGCGGCGGTT CGGAGAACAA GTCGAAATTC
GCGATGCTCA ACCCGTCGGA GTCGATCGTC GACTGGGTGC TCGAGATGAT CCCGAAGATG
GGCGCCGGCT GGTGCCCGCC CGGAATGCTC GGCATCGGCA TCGGCGGCAC CGCCGAGAAG
GCGATGACGA TGGCCAAGGA GTCGCTGATG GGCGACATCG ACATGGCCCA GCTCAAGGCG
CGAGGGGCCC AGAACGACAT CGAGAAGCTG CGCATCGAGA TCTTCGACAA GGTCAACGCG
CTCGGCATCG GCGCGCAGGG CCTGGGCGGC CTGTCGACCA TCCTCGACGT CAAGATCATG
GACTATCCGA CCCATGCGGC ATCGAAGCCG GTGGCGATGA TCCCGAACTG CGCGGCGACC
CGCCATGCGC ATTTCCACCT CGACGGATCG GGGCCGGCCT ATCTCGACCC GCCGAGCCTC
GACGAATGGC CCAAGGTCGA ATGGGCGCCG TCGAAGGAGT CGATCCGCGT CGACCTCGAC
ACGCTGACGC CCGAGGTGGT GGCAAGCTGG AAGCCGGGTG ACCGCCTGCT GCTCAACGGC
AAGATGCTCA CCGGCCGCGA CGCCGCGCAC AAGCGCATCC AGGACATGCT GGCCAAGGGC
GAGGAGCTGC CGGTCGATTT CAAGGGCCGC GTGATCTATT ATGTCGGCCC GGTCGATCCG
GTGCGCGACG AGGTCGTCGG CCCGGCGGGC CCGACCACCG CGACGCGGAT GGACAAGTTC
ACCGAGATGA TGCTCGACCA GACCGGCCTG ATCGCGATGG TCGGCAAGGC CGAGCGCGGC
CCGACGGCGA TCGAGGCAAT CCGCAAGCAC AAGGCCGCCT ATCTGATGGC GGTCGGCGGC
GCCGCCTATC TGGTCGCCCG CGCGATCAAG GGCGCCAAGG TCGTCGGCTT CGCCGACCTC
GGCATGGAGG CGATCTACGA GTTCGACGTG AAGGACATGC CGGTCACCGT CGCGGTCGAC
GCGACCGGCG AGAGCGTCCA CCACACCGCC CCGCTCGTCT GGCGCGAGAA GATCGCGCGG
GAGAAGCTGC TCGAGAATGC GTGA
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| Protein sequence | MTVIIKEADL IESIADALQY ISYYHPMDYI KALGAAYEAE QGPAAKDAIA QILTNSRMCA
EGHRPICQDT GIVTVFIKWG QQCMLDSEKS LQEVVDEGVR RAYLHPENRL RASILRDPAF
SRVNTKDNTP SVMNVEMVPG HHVEVAVAAK GGGSENKSKF AMLNPSESIV DWVLEMIPKM
GAGWCPPGML GIGIGGTAEK AMTMAKESLM GDIDMAQLKA RGAQNDIEKL RIEIFDKVNA
LGIGAQGLGG LSTILDVKIM DYPTHAASKP VAMIPNCAAT RHAHFHLDGS GPAYLDPPSL
DEWPKVEWAP SKESIRVDLD TLTPEVVASW KPGDRLLLNG KMLTGRDAAH KRIQDMLAKG
EELPVDFKGR VIYYVGPVDP VRDEVVGPAG PTTATRMDKF TEMMLDQTGL IAMVGKAERG
PTAIEAIRKH KAAYLMAVGG AAYLVARAIK GAKVVGFADL GMEAIYEFDV KDMPVTVAVD
ATGESVHHTA PLVWREKIAR EKLLENA
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