| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4652 |
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| Symbol | |
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| ID | 5198079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5118782 |
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| End bp | 5120176 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640584206 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001265127 |
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| Protein GI | 148557545 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.964655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGCTG AGCGCGGCGT CGCGATGCTG GCGCTGGCGA TGCTCGCGGG CTGCTCGATG
GCGCCCGCCT ATCGCCCGCC GCAGACGCCG GCGCCGGAGA GCTTCAAGGA GGTCGAGGGT
TGGGCTGCCG CGACGCCGAT GGACGGCGCG CCGCGCGGCG ACTGGTGGAC GGCGTTCGAC
GATCCCGTGC TCGACGACCT GATCGCGCGC GCCGCGCGGG CGAGCCCGAC GCTGGAGGCG
GCGCTCGCCC GCTACAACCA GGCGCGCGCG GCGGCGCGGA TCGAGTCCGC CGACCTGTTC
CCGCAGATCG CGGCCGGCGC CGATGCGGGC CGCCAGCGCG TGTCGGGCAA CCGCTTCAAT
GGCAACGGCA CCGCCCAGAC CTACGACCAG TACACGGTCG GCGCGACGCT CGACTATGAG
GTCGACCTGT GGGGCCGCAT CCGCAACGGC GCCAGGGCGG CGCGCGCCGA TGCCGAGGCG
AGCGGTGACG ACCTCGCCTC GGCCCGGCTC AGCCTCCAGA CCGCCGTCGC CGACGCCTAT
GCGCGGCTGC GCGGGCTCGA CGCCGAGGCG GCGTTGCTGC GCCAGACCGT CGACGCCTTC
GGCAAGGCCT ATGACCTGAC CGCGAAGCGC CACAATGGCG GCATCGCCTC GGGCATCGAC
GTCAATCGCG CACGGACCGT GCTCGACAAT GCCCGCGCGC AGATTTCGGC GATCGCCAAC
CAGCGCGCGG CGACCGAGCA TGAGATCGCC GCGCTGGTCG GCGCGGTGGC GTCGGACTTC
GCGATCCCGG TGCGCGACCA GCCGCTGCTG TCGCCGGCGA TGCCGTCCGG AGCGCCGTCC
GCCCTGCTCC AGCGGCGGCC CGACATCGCC GCGGCCGAGC GGCGGATGTT CGCCGCCAAT
GCCCGGATCG GGGTCGCGCG GGCCGCTTTC TTCCCGACGC TGACGCTCGG CCTCGCCGGC
GGCTGGCAGA CCACGCATGG CGAGCTGTTC GCGGCGCCCA ACGGCTTCTG GGGGCTCGGG
CCGGCCTCGG CGCTGCTGTC GCTGTTCGAC GGCGGCCGGC GCAAGGCGGG GGTGCGCCTG
TCGCGCGCCG AATATGACGA GCTGGCGGCC GACTATCGCG GTACCGTGCT GACCGCCTTC
CGCGAGGTCG AGGACGCGCT GGCGGCGAGC CGCCACCTCG CCGACCAGAT CGCCCAGCAG
CGCAGCGCCG CGACGGCGGC CGAGCGGACC AGCCAGCTTG CGCTGACCCG CTATCGCGAC
GGCGCGGCGG ACTATCTGGA GGTGGTGACG GCGCAGACCG ACGCGCTCGA TGCGCGGCGC
GCCCTGCTGT CGGCGGAGAC CCAGCGCATG CGCGCCAGCG TCGCGCTGGT CCGGGCGCTG
GGCGGCGCAG CCTGA
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| Protein sequence | MRAERGVAML ALAMLAGCSM APAYRPPQTP APESFKEVEG WAAATPMDGA PRGDWWTAFD
DPVLDDLIAR AARASPTLEA ALARYNQARA AARIESADLF PQIAAGADAG RQRVSGNRFN
GNGTAQTYDQ YTVGATLDYE VDLWGRIRNG ARAARADAEA SGDDLASARL SLQTAVADAY
ARLRGLDAEA ALLRQTVDAF GKAYDLTAKR HNGGIASGID VNRARTVLDN ARAQISAIAN
QRAATEHEIA ALVGAVASDF AIPVRDQPLL SPAMPSGAPS ALLQRRPDIA AAERRMFAAN
ARIGVARAAF FPTLTLGLAG GWQTTHGELF AAPNGFWGLG PASALLSLFD GGRRKAGVRL
SRAEYDELAA DYRGTVLTAF REVEDALAAS RHLADQIAQQ RSAATAAERT SQLALTRYRD
GAADYLEVVT AQTDALDARR ALLSAETQRM RASVALVRAL GGAA
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