| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4651 |
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| Symbol | |
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| ID | 5198078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5117584 |
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| End bp | 5118792 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640584205 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001265126 |
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| Protein GI | 148557544 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.611035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATC CCGTCAGCAC CCCCGAAAGC CAGATCGATC GCGGCCCCGA CGGCCGCACC
CTGAAGCGGG TGGGCATCGG CGCCGGCGCG GTCGCGCTGA TCGTCGTCGG CCTCGGCGTC
GCCTCGCGCA TCAGCGCCAC CAACGAGCTG CGCCGGACCG CCGCCGACGC GGCGGTGCCG
ACCGTGTCGG TGGTGCTGCC CGGCGTCGAC GGGGAAGGGG CGAAGCTGCT GCTGCCCGGC
ACCGTCCAGG CGTTCAACAG CGCCGCCATC TATGCGCGGA CCAACGGCTA TGTCCGCCGC
TGGCTCGCCG ACATCGGCGA CCGGGTGCAT GCGGGCCAGC CGCTCGCGGT GCTCGACGCG
CCCGAGCTCG ACCAGCAGCT CGCGGCCGCC CGCGCCGATT ACCAGACCGC GCTCGCCAAC
CAGCGCCTCG CCGACACCAC GGCGAAGCGG TGGAGCGCGA TGCTGGCGCA GGACGCGGTG
TCGCGGCAGG AGGCGGACGA GAAGGCCGGT GATCTCGCCG CGCGCACCGC GTTGTCCAAC
GCCGCCCTCG CCAATGTGAA GCGGCTCCAG GCGCTGCAGG GCTTCACCCG CCTGACCGCG
CCCTTCGACG GCGTGGTGAC GAGCCGGTCG GCGCAGATCG GCGCGCTGGT CGTCGCGGGC
AATGCGGCGG CGCAACCGCT GTTCACCGTG TCCGATACGC ATCGCATGCG CGTCTATGTC
CGCGTGCCGC AGGGCTATTC GGCCTCGATC CGTCCCGGCA TGGAAGCGAC GCTGTCGCTG
CCCGAATATC CAGGCCGCGC CTTCACCGCG ACGCTGACCC GCAGCGCGGG CGCGGTCGAC
GCGCAGTCGG GCGCGGTGCT GGTCGAGCTC CAGGCCGACA ATCGCGACGG CGCGCTCAAG
CCGGGGGCGT TCGCGCAGGT CGACTTCCGG GTCGGCGCGG GCCAGGGCAA GGGCGTCAGC
CTGCCCGGCA GCGCGATCCT CTACGGCAAT GACGGGCCGA GCGTCGCAGT GGTCGGCCGC
GACGGCCATG TCACCGTCAA GTCCGTCGCG ATCGCCCGCG ACGAAGGCGC CACGGTGCTG
CTGTCGGGCG GCGTCGCCCC GGGCGAGCGG GTGATCGACA CGCCCCCCGA TGCGATCCGC
AGCGGCGATC GGGTGCGGGT GCAGGCGGCG GCCGAGGCCG CCGGCAAGGG CGCGGCGCAT
GCGGGCTGA
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| Protein sequence | MPDPVSTPES QIDRGPDGRT LKRVGIGAGA VALIVVGLGV ASRISATNEL RRTAADAAVP
TVSVVLPGVD GEGAKLLLPG TVQAFNSAAI YARTNGYVRR WLADIGDRVH AGQPLAVLDA
PELDQQLAAA RADYQTALAN QRLADTTAKR WSAMLAQDAV SRQEADEKAG DLAARTALSN
AALANVKRLQ ALQGFTRLTA PFDGVVTSRS AQIGALVVAG NAAAQPLFTV SDTHRMRVYV
RVPQGYSASI RPGMEATLSL PEYPGRAFTA TLTRSAGAVD AQSGAVLVEL QADNRDGALK
PGAFAQVDFR VGAGQGKGVS LPGSAILYGN DGPSVAVVGR DGHVTVKSVA IARDEGATVL
LSGGVAPGER VIDTPPDAIR SGDRVRVQAA AEAAGKGAAH AG
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