| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4634 |
|---|
| Symbol | |
|---|
| ID | 5200925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 5101334 |
|---|
| End bp | 5102692 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640584189 |
|---|
| Product | N-formimino-L-glutamate deiminase |
|---|
| Protein accession | YP_001265110 |
|---|
| Protein GI | 148557528 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | [TIGR02022] formiminoglutamate deiminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.215147 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCC AACAGTCTTT CCATTTCGAC CGGATTTTGC TGCCCGAGGG CTGGACGAGG
GACGTCGCGA TCACCGTGCG CGACGGGCTG GTCGCGGCTG TCGAGCCGGG CGTTGCGCCA
GCCGCGGGCG TCGAGCGCCA CGCGATCGCG TTGCCCGGCC TGCCCAACCT CCACAGCCAC
GCCTTCCAGC GCGGCATGGC GGGGCTGGCC GAGGTCAATC TGGGCGGCGA CGACAGTTTC
TGGAGCTGGC GCGAGACGAT GTACCGCTTC GTCGCGCGGC TGACCCCCGA CCATCTGCGC
GCGATCGCGG CGCAGGCCTA TGTCGAGATG CTCGAGACCG GCTTCACCCG CGTCGGCGAG
TTCCATTATC TCCACCACGA TATCGGCGGC GGCGTCTTCG CCGATCCGGC GGCGATGAGC
CTCGCGATCG TCGAGGCGGC GGCCGAGACC GGGATCGCGC TCACCCATCT GCCCGTCTTC
TACGCCCATG CCGGCTTCGG CGGGCTCGCG CCGGGCGAGG GGCAGCGCCG CTTCGTCCAC
GACGTCGACG GCTATGCCCG CCTGATCGAC CGGCTGCGCG CGCCGCTCGC GACGCTGCCC
GACGCGGTGC TCGGCGTCGC GCCGCACAGC CTGCGCGCGG TGACCCCCGA CGAGCTGGCG
GCGGTCGCGA CGCTCGGCGA CGGCCCGGTC CACATCCACA TCGCCGAGCA GGTCAAGGAG
GTCGAGGACT GCCTCGCCTG GAGCGGGGCG CGGCCGGTCG AATGGCTGCT CGGCCATGCC
CCGGTCGACG CGCGCTGGTG CCTCGTCCAC GCGACCCACA TGACCGACGA GGAGGCCCGC
CGCTCGGCGG AGAGCGGCGC GGTGGCGGGG CTCTGCCCGA TCACCGAGGC CAATCTGGGC
GACGGCATCT TCCCCGCCGA TCCCTTCCTC GCGGCGGGCG GCGTCTATGG CATCGGATCG
GATTCGAACG TGCTGATCGA CGCGAGCGAG GAGCTGCGCC TGCTCGAATA TGGCCAGCGG
CTCGCCCATC GGCGGCGCAA CCGGCTCGCC CCGGCGGGCG CGTCGGTGGG CGACACGCTG
TATCGCGCGG CGGTCGCGGG CGGGGCGCGG GCGCTCAGCG CGCCGGCGGG GCTGGCGGTC
GGCCACCCGG CCGATTTCGT GACGCTCGAC GCCGATCATC CGGCGCTGGT CGAGCGCGAC
GCCGGGCTGC TGACCGACGG CTGGCTGTTC GCCGCCGGGC GGCAGGCGAT CGATGGGGTC
TGGCGGCGCG GGCGTCGGCT CGTTACGGCA GGTCGCCATG CCGATCGCGC GCGGATCGCC
GCGCGCTATC GCCGGATATT GGGGGAAGTG CTGGCATGA
|
|---|
| Protein sequence | MSGQQSFHFD RILLPEGWTR DVAITVRDGL VAAVEPGVAP AAGVERHAIA LPGLPNLHSH
AFQRGMAGLA EVNLGGDDSF WSWRETMYRF VARLTPDHLR AIAAQAYVEM LETGFTRVGE
FHYLHHDIGG GVFADPAAMS LAIVEAAAET GIALTHLPVF YAHAGFGGLA PGEGQRRFVH
DVDGYARLID RLRAPLATLP DAVLGVAPHS LRAVTPDELA AVATLGDGPV HIHIAEQVKE
VEDCLAWSGA RPVEWLLGHA PVDARWCLVH ATHMTDEEAR RSAESGAVAG LCPITEANLG
DGIFPADPFL AAGGVYGIGS DSNVLIDASE ELRLLEYGQR LAHRRRNRLA PAGASVGDTL
YRAAVAGGAR ALSAPAGLAV GHPADFVTLD ADHPALVERD AGLLTDGWLF AAGRQAIDGV
WRRGRRLVTA GRHADRARIA ARYRRILGEV LA
|
|---|
| |