Gene Swit_4632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4632 
Symbol 
ID5196112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5098533 
End bp5100062 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content73% 
IMG OID640584187 
Producthistidine ammonia-lyase 
Protein accessionYP_001265108 
Protein GI148557526 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2986] Histidine ammonia-lyase 
TIGRFAM ID[TIGR01225] histidine ammonia-lyase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.551445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA TCCTCCTCAA GCCGGGCGCC GTGCCGCTCG CCGACTGGCG CGCCATCTAT 
CAGGGCGCGG CGCCGAGCCT CGACCCCGCA TCGGCTCCCG TCATCGCCGC GAGCGCGGCG
GCGGTCGAGC GGATCATCGC CCAGCACAAG CCGGTCTACG GCCTCAACAC CGGCTTCGGG
AAGCTCGCCA GCGTCAAGAT CGGCGACGAG GACCTCGCCA CGCTCCAGCG CAACATCGTG
CTGAGCCATG CGGCGGGGAC CGGCGCGCCC TCCCCCGTCC CGGTCGTCCG GCTGATGATG
GCGCTCAAGC TCGCCAGCCT CGCCCAGGGC GCCTCGGGCG TGCGGCCGGA GACGGTCGAG
ATGCTGGAGG CGATGCTGCT CGCCGGGCTG ACCCCGGTGG TGCCGTCGCA GGGATCGGTC
GGCGCCTCGG GCGACCTCGC CCCGCTCGCG CACATGGCGG CGGCGATGAT CGGCGTCGGC
CAGATCGAGG TGGCCGGCCA GGTGCTGAGC GCCGAGGGCG CGCTCGCCCG CGCCGGGCTG
GCGCCGCTGT CGCTGGGCCC GAAGGAAGGA CTGGCGCTGC TCAACGGCAC GCAATTCTCG
ACCGCCAACG CGCTGGCCGG GCTGTTCGAG ACCGAGACGA TCTTCCGCTC GGCGCTCGTC
ACCGGCGCGC TCGCGACCGA GGCGGCCAAG GGTTCCGACA CCCCGTTCGA TCCGCGCATC
CACGCGCTGC GCCGCCAGCC CGGCCAGATC GAGACGGCCG ACGCGCTGCG CCGGCTGATG
GAAGGCTCGG CGATCCGCGC GAGCCATCTG GTCGACGACG CGCGGGTGCA GGACCCCTAT
TGCCTGCGCT GCCAGCCGCA GGTGATGGGC GCAGTGCTCG ACCTGCTGCG CCAGGCCGCG
ACGACGCTGG AGGTCGAGGC GAACGGCGTC TCCGACAATC CGCTGATCTT CCCGGACACC
GACGAGGCGC TGTCGGGCGG CAATTTCCAC GCCGAGCCGG TCGCCTTCGC CGCCGACATG
ATCGCGCTGG CGATCTGCGA GATCGGATCG ATCACCGAGC GGCGGATCGC GATGCTGGTC
GATCCCGCGC TGTCGGGGCT GCCGGCCTTC CTGACCCCGC AGCCGGGCCT CAATTCGGGC
TTCATGATCC CGCAGGTGAC GGCGGCCGCG CTGGTCTCCG AGAACAAGCA GCGCGCCACC
CCGGCGAGCG TCGACTCGCT GCCGACCTCG GCCAATCAGG AAGACCATGT CTCGATGGCG
GCGCACGGCG CGCGGCGGCT GCTCGACATG GCCGCCAACG CCAATGCGAT CGTCGGCATC
GAGCTGCTTG CCGCCGTGCA AGGGTGCGAC TTCCACGCGC CGCTCCGGTC GAGCGGCCCG
CTCGAAGCCG CCCGCGCCGT GCTGCGCGCG CAGGTGCCGA TGCTCGACCA TGACCGGCAT
TTCCACCCCG ACATGGAGGC GGCCAACGCG CTGGTCCGCT CGGGCGCGCT GGTGACGGCG
GCGGCGATCG CGCTGCCGGG ACTGGCGTGA
 
Protein sequence
MSDILLKPGA VPLADWRAIY QGAAPSLDPA SAPVIAASAA AVERIIAQHK PVYGLNTGFG 
KLASVKIGDE DLATLQRNIV LSHAAGTGAP SPVPVVRLMM ALKLASLAQG ASGVRPETVE
MLEAMLLAGL TPVVPSQGSV GASGDLAPLA HMAAAMIGVG QIEVAGQVLS AEGALARAGL
APLSLGPKEG LALLNGTQFS TANALAGLFE TETIFRSALV TGALATEAAK GSDTPFDPRI
HALRRQPGQI ETADALRRLM EGSAIRASHL VDDARVQDPY CLRCQPQVMG AVLDLLRQAA
TTLEVEANGV SDNPLIFPDT DEALSGGNFH AEPVAFAADM IALAICEIGS ITERRIAMLV
DPALSGLPAF LTPQPGLNSG FMIPQVTAAA LVSENKQRAT PASVDSLPTS ANQEDHVSMA
AHGARRLLDM AANANAIVGI ELLAAVQGCD FHAPLRSSGP LEAARAVLRA QVPMLDHDRH
FHPDMEAANA LVRSGALVTA AAIALPGLA