Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4632 |
Symbol | |
ID | 5196112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 5098533 |
End bp | 5100062 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640584187 |
Product | histidine ammonia-lyase |
Protein accession | YP_001265108 |
Protein GI | 148557526 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.551445 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA TCCTCCTCAA GCCGGGCGCC GTGCCGCTCG CCGACTGGCG CGCCATCTAT CAGGGCGCGG CGCCGAGCCT CGACCCCGCA TCGGCTCCCG TCATCGCCGC GAGCGCGGCG GCGGTCGAGC GGATCATCGC CCAGCACAAG CCGGTCTACG GCCTCAACAC CGGCTTCGGG AAGCTCGCCA GCGTCAAGAT CGGCGACGAG GACCTCGCCA CGCTCCAGCG CAACATCGTG CTGAGCCATG CGGCGGGGAC CGGCGCGCCC TCCCCCGTCC CGGTCGTCCG GCTGATGATG GCGCTCAAGC TCGCCAGCCT CGCCCAGGGC GCCTCGGGCG TGCGGCCGGA GACGGTCGAG ATGCTGGAGG CGATGCTGCT CGCCGGGCTG ACCCCGGTGG TGCCGTCGCA GGGATCGGTC GGCGCCTCGG GCGACCTCGC CCCGCTCGCG CACATGGCGG CGGCGATGAT CGGCGTCGGC CAGATCGAGG TGGCCGGCCA GGTGCTGAGC GCCGAGGGCG CGCTCGCCCG CGCCGGGCTG GCGCCGCTGT CGCTGGGCCC GAAGGAAGGA CTGGCGCTGC TCAACGGCAC GCAATTCTCG ACCGCCAACG CGCTGGCCGG GCTGTTCGAG ACCGAGACGA TCTTCCGCTC GGCGCTCGTC ACCGGCGCGC TCGCGACCGA GGCGGCCAAG GGTTCCGACA CCCCGTTCGA TCCGCGCATC CACGCGCTGC GCCGCCAGCC CGGCCAGATC GAGACGGCCG ACGCGCTGCG CCGGCTGATG GAAGGCTCGG CGATCCGCGC GAGCCATCTG GTCGACGACG CGCGGGTGCA GGACCCCTAT TGCCTGCGCT GCCAGCCGCA GGTGATGGGC GCAGTGCTCG ACCTGCTGCG CCAGGCCGCG ACGACGCTGG AGGTCGAGGC GAACGGCGTC TCCGACAATC CGCTGATCTT CCCGGACACC GACGAGGCGC TGTCGGGCGG CAATTTCCAC GCCGAGCCGG TCGCCTTCGC CGCCGACATG ATCGCGCTGG CGATCTGCGA GATCGGATCG ATCACCGAGC GGCGGATCGC GATGCTGGTC GATCCCGCGC TGTCGGGGCT GCCGGCCTTC CTGACCCCGC AGCCGGGCCT CAATTCGGGC TTCATGATCC CGCAGGTGAC GGCGGCCGCG CTGGTCTCCG AGAACAAGCA GCGCGCCACC CCGGCGAGCG TCGACTCGCT GCCGACCTCG GCCAATCAGG AAGACCATGT CTCGATGGCG GCGCACGGCG CGCGGCGGCT GCTCGACATG GCCGCCAACG CCAATGCGAT CGTCGGCATC GAGCTGCTTG CCGCCGTGCA AGGGTGCGAC TTCCACGCGC CGCTCCGGTC GAGCGGCCCG CTCGAAGCCG CCCGCGCCGT GCTGCGCGCG CAGGTGCCGA TGCTCGACCA TGACCGGCAT TTCCACCCCG ACATGGAGGC GGCCAACGCG CTGGTCCGCT CGGGCGCGCT GGTGACGGCG GCGGCGATCG CGCTGCCGGG ACTGGCGTGA
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Protein sequence | MSDILLKPGA VPLADWRAIY QGAAPSLDPA SAPVIAASAA AVERIIAQHK PVYGLNTGFG KLASVKIGDE DLATLQRNIV LSHAAGTGAP SPVPVVRLMM ALKLASLAQG ASGVRPETVE MLEAMLLAGL TPVVPSQGSV GASGDLAPLA HMAAAMIGVG QIEVAGQVLS AEGALARAGL APLSLGPKEG LALLNGTQFS TANALAGLFE TETIFRSALV TGALATEAAK GSDTPFDPRI HALRRQPGQI ETADALRRLM EGSAIRASHL VDDARVQDPY CLRCQPQVMG AVLDLLRQAA TTLEVEANGV SDNPLIFPDT DEALSGGNFH AEPVAFAADM IALAICEIGS ITERRIAMLV DPALSGLPAF LTPQPGLNSG FMIPQVTAAA LVSENKQRAT PASVDSLPTS ANQEDHVSMA AHGARRLLDM AANANAIVGI ELLAAVQGCD FHAPLRSSGP LEAARAVLRA QVPMLDHDRH FHPDMEAANA LVRSGALVTA AAIALPGLA
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