Gene Swit_4629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4629 
Symbol 
ID5196109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5095336 
End bp5095881 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content74% 
IMG OID640584184 
Producthypothetical protein 
Protein accessionYP_001265105 
Protein GI148557523 
COG category[S] Function unknown 
COG ID[COG3758] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.355004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGG TCATCCGGAT CGCGGATCGC CCGGCGGTCC CGTGGAAGAA TGGCGGCGGG 
ACGACGCGCG AGATCGCCGT CTTCCCGCCG GACGCCGGCA TGGACGATTT CGTCTGGCGG
CTGAGCATGG CGCGGGTCGA GCAGGCGGGC GCCTTCTCGG CCTTCGACGG GGTCGATCGC
GTGCTCGCCG TGCTGGAAGG CAGGCTGTTC CTGTCCGGCG CGGGCCTGGA CGTCGCGCTC
GACGGGGACA GCGCGCCCTT CGCTTTCGAC GGCGGGGCAC CGATCGCCGG CGAGCCGCTG
GCCGGCCCGG TGCTCGACCT CAACGCCATG GCGCGGCGTG GGCGGTGCGG CGTCGCGATG
GAGCGCCTCG CGGCGGGCGC CGAGGTCGCG GGCGGCGATG CGATCTTCCT CCTCGCCCTC
GAACCGCAGC GGATAGGGGC GGACGAACTC GGCCGGCTCG ACGTGCTCAG CGTCGCCGAC
CCCGTGACGG CCGGCGGCGC GGCGCTGCTG GTCCGCTTCA CCGTGGAGGG CTCAACGCGC
CGTTAA
 
Protein sequence
MNRVIRIADR PAVPWKNGGG TTREIAVFPP DAGMDDFVWR LSMARVEQAG AFSAFDGVDR 
VLAVLEGRLF LSGAGLDVAL DGDSAPFAFD GGAPIAGEPL AGPVLDLNAM ARRGRCGVAM
ERLAAGAEVA GGDAIFLLAL EPQRIGADEL GRLDVLSVAD PVTAGGAALL VRFTVEGSTR
R