Gene Swit_4627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4627 
Symbol 
ID5200220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5093372 
End bp5093758 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content68% 
IMG OID640584182 
Productresponse regulator receiver protein 
Protein accessionYP_001265103 
Protein GI148557521 
COG category[T] Signal transduction mechanisms 
COG ID[COG0784] FOG: CheY-like receiver 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.910799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGTCC TGATCATCGA AGACGAGCCG CTGGTCGCTT CGGATCTTGA ATGCTTCCTG 
AGCGAACTTG GCGCGGATAG CTGCGATCTT GTCGAGACCG AACGGGCGGC GGTCGCGGCC
GCGCTCGATC ACGCGCCCGA CCTGATCACG GCGGACTGCC GGCTGCGCGA AGGATCGGGC
GTCGACGCGG TGGCGTCGAT CCGCCGGTCG CTCGGCAGCA TCCCGGTGGT GTTCATCACC
GGCGATCCGC GCGGCTGCGA TGCCCGGGAC GACATGACCC ACATGCTGGT CAAGCCGATC
CGCTGGCTCG ACCTCGCCAC CGCCGTCGCC AGCCACAACC TGCCGCCGGC CGGCGGTTCG
GACGGGGAAG CCGACCGGAT CGGATAA
 
Protein sequence
MHVLIIEDEP LVASDLECFL SELGADSCDL VETERAAVAA ALDHAPDLIT ADCRLREGSG 
VDAVASIRRS LGSIPVVFIT GDPRGCDARD DMTHMLVKPI RWLDLATAVA SHNLPPAGGS
DGEADRIG