| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4625 |
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| Symbol | |
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| ID | 5200218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 5090045 |
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| End bp | 5092306 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640584180 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001265101 |
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| Protein GI | 148557519 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.175039 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAG GTCAGCTTCT CACGAGCGTC GCGGCTTTCG CCTTCCTCGG CATGTGGGCG
ATGCCCGCCG CCGCCCAGAC GCCGGCATCG TCGGAAACCG ACGATGCCGA GATCGTGGTG
TTCGGAAAGG GTGAGACCCG CCAGGTACAG ACGGTGACCG CGGTGGATAT CGCCGTCGCC
ACGCCCGGCA CGAGCCCGCT CAAAGTGCTG GAAAAATTAC CGGGCGTCTC GTTTCAGTCC
GCGAATGCCC TCGGCAGCAA CGAATGGTCG AGCCGCATTT CGATCCGTGG CTTCAACCAG
AACCAGCTCG GCTTCACGCT CGACGGCGTA CCGCTGGGCG ACATGAGCTA TCATAATTTC
AACGGGCTCC ACATCAGCCG CGCGATCGCC TCCGAGAATA TCGGCAGGAC CACGCTCGCG
CAGGGGTCCG GCGCGCTCAG CACCGCCTCC AGCTCGAACC TCGGCGGCAC CGTGCAGTTC
TTCAGCAAGG CGCCGTCACC CGACTTCGGC CTCGATGGAG AGGTGAGCTA CGGCAGCGAG
AACGCCTACC GCCTGTTCGG CCGGCTCGAA ACCGGCGACC TCGGCAACGG CATCATGGGC
TATGTCAGCG GTTCCTGGCT GGACGCGCCG AAATGGAAGG GCCAGGGCAA GCAGGAGGCC
TGGTCGATCA ACAGCAAGCT GGTCGTGCCG CTCGGCGAGC GGGGGCAGGT CGCCGCCTTC
GTCAACTATT CCGACTTCAA GGACGACGAC TATATGGACA TGTCGTTGTC CCTGATCCGG
AAATATGGGT GGAACTGGGA TTATATCCGG AACGACTATC CAACGGCGAT GGCGATCGCG
ACCAATCTCC AGAACGGCGT CTATTGCGCC AATTATGCGG GATATTCGCA GCAGATCTGC
GGCGACGACA CCTATTATGA CGCCTATGGC CTCCGCAAGG ATTTCCTGGC CGGCGCCAAT
ATCGACTATG AACTGGCCGA TGCGGTCACC CTCAAGCTGA CCCCATACTA TCATCGGCAT
CGCGGCATCA GCACCTGGTT CACGCCGTAC ACGCCGACCC CGGGCGGCTC CCCCATGTCG
GTGCGCGGGG CGACCTATGC GATCAATCGC GGCGGCGCGA CCGGCTCCCT GTCGTTCACC
TTCGGCGACC ATCAGCTGGA GATCGGCGGC TGGTACGAAT ATAATCGCTA CCGCGCCGGC
CGCCCCTATT TCCCCCTTGC CGCGTCCAAC GTCGCGAGCA TCGGCAAGCG CGAGTGGCCG
AAGAACCCCT TCGCCAGCGA CTATTCGTAC AATTTCAAGA TCAAGACCTA CCAATATTTC
ATCCAGGACA CCTGGAACCT GACCCCCGAA CTCAAGATGA ACTACGGGTT CAAGGGGATC
AGGAACACCG TCATCAACGA GTATAATCCG GCGAACAGCC CGAACCGGGA CACGTCCGGC
CTGCTGAGGG CCAAGGACAT GTTCATCCCG CAGATCGGCG TCAACTACGC CGTCTCGCGC
GCGTTCGAGC TGTTCGCCAG CTACACCGAG AACATGCGCG CCTTCACCAC GGAGCCCTTC
CTGACGAGCC GGGCGGGCTT CCTCGCGGTC AAGGACGTGA TCAAGCCCGA GACCTCCTGG
ACGCTGGAGG GCGGCCTGCG CTTCCACCTC CGGAACTTCG AGGGCTCGAT CGCCGGCTAT
CACGTCAAGT TCGACGACAG GCTGCTTTCG GTGCAGCCCT GCGCGATCAT CATCGGCTGT
CCGTCGATCC TGTCCAATGT CGGCTCGGTC ACCACCAACG GGATCGAGAT GGCGGGGACC
TATCGGCTGA CCCGCGCCCT GTCGCTGTAC GGCGCCTATG CCTATACGGA TGCGCAATAT
GACGACGACA TCCTGAGCGG CGTGCTCTAC GCCACGAAGA ACAAGACGGT GGTCAACACG
CCGAAGCACC TGATCAACGG CGAGATCGCC TATGACGACG GGGCCCTGTT CGGCCGGATC
TCCGCCAATT ACCAGAGCAA GCGCTATTAC ACCTACATCA ACGACAACAG CGTCAAGGGC
CGCGCGCTGG TCGATCTTTC GGCCGGCTAT CGCTTCCCGG AGGGGGGCGG CCTGCTCGAC
GGCCTCGAGC TCCAGGCCAA TGTGACCAAC CTGTTCGACA AGAAATATAT CAGCACGGTG
GGGCAGACCG CGCTGAAATT CTCCGATCCG GGCGGGAACG TCCAATCGAT GCTCGTGGGG
ACGCCCCGGC AGGTCTTCCT GTCGCTTCGC AAGCATTTCT GA
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| Protein sequence | MNKGQLLTSV AAFAFLGMWA MPAAAQTPAS SETDDAEIVV FGKGETRQVQ TVTAVDIAVA
TPGTSPLKVL EKLPGVSFQS ANALGSNEWS SRISIRGFNQ NQLGFTLDGV PLGDMSYHNF
NGLHISRAIA SENIGRTTLA QGSGALSTAS SSNLGGTVQF FSKAPSPDFG LDGEVSYGSE
NAYRLFGRLE TGDLGNGIMG YVSGSWLDAP KWKGQGKQEA WSINSKLVVP LGERGQVAAF
VNYSDFKDDD YMDMSLSLIR KYGWNWDYIR NDYPTAMAIA TNLQNGVYCA NYAGYSQQIC
GDDTYYDAYG LRKDFLAGAN IDYELADAVT LKLTPYYHRH RGISTWFTPY TPTPGGSPMS
VRGATYAINR GGATGSLSFT FGDHQLEIGG WYEYNRYRAG RPYFPLAASN VASIGKREWP
KNPFASDYSY NFKIKTYQYF IQDTWNLTPE LKMNYGFKGI RNTVINEYNP ANSPNRDTSG
LLRAKDMFIP QIGVNYAVSR AFELFASYTE NMRAFTTEPF LTSRAGFLAV KDVIKPETSW
TLEGGLRFHL RNFEGSIAGY HVKFDDRLLS VQPCAIIIGC PSILSNVGSV TTNGIEMAGT
YRLTRALSLY GAYAYTDAQY DDDILSGVLY ATKNKTVVNT PKHLINGEIA YDDGALFGRI
SANYQSKRYY TYINDNSVKG RALVDLSAGY RFPEGGGLLD GLELQANVTN LFDKKYISTV
GQTALKFSDP GGNVQSMLVG TPRQVFLSLR KHF
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