| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4624 |
|---|
| Symbol | |
|---|
| ID | 5200217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 5088888 |
|---|
| End bp | 5089937 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640584179 |
|---|
| Product | protein tyrosine/serine phosphatase |
|---|
| Protein accession | YP_001265100 |
|---|
| Protein GI | 148557518 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2365] Protein tyrosine/serine phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.713169 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGGA CAGTCTCCAT CGCCGCGCTG TTGCTGGCCG CGACGCCGGC TCCGCTGATC
GCCGGACCGC CGGGGGGGCT GACCGTCGAA CGGTCCCAGC CCGACCGCCT GAAGGTCCGC
TGGACCAGTC CCCATCCGGT CGACGTCTAT ATGGCCGACC GGCCCGACGC CGCCATCGAG
GCGGCGCGCC TCGTCTCCGC CGACGATCGC GACGGCGTCT ACGAGACGAC GGTTCCGCCA
CGGGGACATC CCTATTTCTT CGTGCGCGAT CATCGGGACG GCGCCGGCCT GTGGGCGGCG
GAGCGCCTCA TCCCGCTGGA GCGGGGCTCG AACTTCCGCG ACGTCGGCGG CTATCCGGCG
GCCGGGGGCA AGCATGTCCG CTGGGGCATG ATCTATCGCT CGGCCGCCAC GCCCCTTCTC
GGCGGCGGCG ATCTCGAGAC GATCGGCCGT CTCGGGCTCA CCGACATGGT GGACCTGCGC
AGCAGCGAGG AGCGCCAGCT GGCGCCCACC AGGATCGGCG GCGTCGCCTA TCATGCGGTC
GGCTATTCGA TCAGGGATAT CCTGTCGACC GACGAGGCCG ACGACATCAG CTGGGCCGAC
ATCTATCGGC GCATGCCGGA GCAGCTCGCC CCACAGATGC GCCTGCTGTT CCGCCTGCTC
CTCGCCCATC AGGGCCCGCT CGCCTATAAT TGCTCGGCGG GACAGGACAG GACCGGTTTC
GCGACGGCGC TGATCCTCAC CGCGCTCGGC GTGCCGCGCG ACGCCATCCT GGCCGACTAT
CATCTTTCCA CCCGCTATCG CCGCCCGGCC TTTGAAATGC CGAAATTCGA TCCGGCGGCC
TTCCCCGACA ATGCGGCCGC GCGACTGTTC AGCCCCGCCG ACGAGGAAGA GAAGCCCCAT
CCCCTGCTGG AGCCGGACGG CACCCCGTTC CTCTCCCATG CGATCGACGA GATCGAGCGG
CGCTATGGCT CGCTCGATAA TTATCTGGAG AAACGCATCG GCATCGACGC CCGGGCCAGG
GAAGCGCTGC GGGCCCGATA TCTGGACTAG
|
|---|
| Protein sequence | MSRTVSIAAL LLAATPAPLI AGPPGGLTVE RSQPDRLKVR WTSPHPVDVY MADRPDAAIE
AARLVSADDR DGVYETTVPP RGHPYFFVRD HRDGAGLWAA ERLIPLERGS NFRDVGGYPA
AGGKHVRWGM IYRSAATPLL GGGDLETIGR LGLTDMVDLR SSEERQLAPT RIGGVAYHAV
GYSIRDILST DEADDISWAD IYRRMPEQLA PQMRLLFRLL LAHQGPLAYN CSAGQDRTGF
ATALILTALG VPRDAILADY HLSTRYRRPA FEMPKFDPAA FPDNAAARLF SPADEEEKPH
PLLEPDGTPF LSHAIDEIER RYGSLDNYLE KRIGIDARAR EALRARYLD
|
|---|
| |