| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4618 |
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| Symbol | |
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| ID | 5198484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5082431 |
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| End bp | 5084632 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640584173 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_001265094 |
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| Protein GI | 148557512 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0845524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGTC GACTTTCAAA ACTGATGGCT TCCGCCGCGA TCGTCATGGG TTCCGCCGGC
GGCGCGATGG CGCAGGTCTC CACCACCGAA GCCGGTTTCG AGCCGGGCGA GATCGTCGTC
ACCGCGCAGA AGCGGACGCA GAGCGCGCAG GCGATCGGCG TCGCCGTCTC GGCGCTGGGG
GCGGACAATC TGGCCGCGCT GGGGCGGCAG GACATATCGG CGCTGGCGGC GCAGGTGCCC
GGCCTGCAGG TCAACCAGTA CAGCCCGACG GTGACCGTCT TCAACATCCG CGGCGTGTCG
CAGAACGACT TCGCGGACAG CCAGGAGGCG CCGATCGCCT TCTACAATGA CGAGGTCTAT
ATCAGCGCGC TCGGCGCGAT CGCCGGCATG ACCTACGACC TCGAACGGGT CGAGGTGCTG
CGCGGGCCGC AGGGCACGCT GTTCGGCCGC AACGCCACCG GCGGCCTGAT CCAGATCGTG
TCGGCCAAGC CGACCGACCA TCTCGACGGC TTCGTCACCG CCACGGTCGG CAGCTATGGC
CAGGTCGCGA CCGAAGGCGC GGTCGGCGGC CCGCTGAGCG ACCGGCTGCG CGCGCGCCTG
TCCTTCACCA CCAACCATGG CGGCGGCTAT TTCAAGAACC GGATCGGCCG GGACCTGGGC
GCCGCGAAAT TCTATGCCGG TCGCATCCAG CTTGCCGGGG ATGTCGGCGA GGGCGGCAAG
TTCAACATCA AGGTGCAGGC CCTGCGCAAC GACCGCGATC GTCAGGCGGG CATATATTCC
CATCGCTCCG CCTTCCCGAA CGCGCTGGGC CTGGGCGTCT ATTTCGACCC GTCCGAAAAC
GCCTGGGGCA ATTGCAACGG CTGCGATGCC CTGGGCTATG CGGAGCCCGA TCGCGATCCC
TTCACCGGAG CGCTCAACGG GCCGAACTAT TTCAGCCGCA CCTTCTGGGC CGTCACCGCG
CGCTACGAAC AGGATCTGGG CGGCGCGACG CTGACCTCGA TCACCGACTA TCAGGACCTG
CGCAAGCGCT ATGGCGAGGA CAGCGACATG TCCCCCGCCA CCAACTTCGT CTACACGACG
GCGCAGGACC TCTATCAGCT TTCCCAGGAA TTGCGGCTGT CGGGGGAGGG CGACCGGCTC
ACCTGGCTTG CCGGCCTCTA CGGCATCAAG ATCCACACGA AGAACGGCTA TGTCACCGAC
ACGACCGGCG CCTTCGGCCT GCTCGAGCGA TATGACAGCG TCCTGAACAC CGAGTCCGTC
GCCGCCTTCG GCCAGCTCGA ATATAAGCTG GACGACCGGT TCACCCTGAT CGGCGGCCTG
CGCTATTCGC GCGACTGGAA ACGGTTCGAT TATGTGCATT CCGAGAATGG CGTGCAGGAC
TTCGCGTTCG ACAGAAGGCT GTTTCCCGAT CTCGCGAAGC GGCGCTTCAG TGATTATTCG
GGCAAGATCG AGCTCGATTT CAAGCCGAGC CGGAACGCCT TCCTTTATGC CAGCGTCAAT
CGCGGCACCA AGAGCGGCGG CTTCGGCACC CAGGCCTTCG GACCCTTCGA TCCGGCGACG
ATCGCCTTCG ATGGAGAGGT TTTGACCAAT GTCGAAGGCG GCGTGAAGCT CACGCTGTTG
AACCGGACGA CGAACTTCAA CGTCGCCGGC TTCCACTACA AATATAGCGG CTACCAATCG
TTCGAACTGG TCGGCGTCAC CCAGATCATC CGCAACAAGC CCGCTCGCAT AAAGGGGCTC
GAATTCGAGT TCACGACCCG TCCGGTTGCC GGCCTCTATC TCCAGGCGTT CCTGACCCTG
CTCGACGGCG AGGTCCGCAA TGTCACGGTT CCCTCGGGCG ATGTCCTCGA TCGGGACATG
CCGCAGGCGC CCTCGCTCAG CGCGGGCGGC CTGATCCGCT ACGAATTCGC GGCGGGGCCG
GGGCGGCTGG CGCTCCAGAC CAACTGGAAG CATGACAGCC GGCAATATTT CTCGACCTTC
AACGCCCCGG TCGATCGCGA GCCGGCCCGC TGGGTCGGCG ATGCGCGCGT CTCCTATGCC
TTCGACGACC TGCCGATCGA GGCCGCCTTC TTCGTCAACA ACCTGACCGA CCGGAAATAC
CGGCTCTACA CGCTCGATCT GTCGGGGCCC TTCGGCTTCA CCCAGCAGAA CTACGCCCGC
CCGCGCTGGT TTGGCGGCAG CCTCACCTAC CGCATCCAAT GA
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| Protein sequence | MASRLSKLMA SAAIVMGSAG GAMAQVSTTE AGFEPGEIVV TAQKRTQSAQ AIGVAVSALG
ADNLAALGRQ DISALAAQVP GLQVNQYSPT VTVFNIRGVS QNDFADSQEA PIAFYNDEVY
ISALGAIAGM TYDLERVEVL RGPQGTLFGR NATGGLIQIV SAKPTDHLDG FVTATVGSYG
QVATEGAVGG PLSDRLRARL SFTTNHGGGY FKNRIGRDLG AAKFYAGRIQ LAGDVGEGGK
FNIKVQALRN DRDRQAGIYS HRSAFPNALG LGVYFDPSEN AWGNCNGCDA LGYAEPDRDP
FTGALNGPNY FSRTFWAVTA RYEQDLGGAT LTSITDYQDL RKRYGEDSDM SPATNFVYTT
AQDLYQLSQE LRLSGEGDRL TWLAGLYGIK IHTKNGYVTD TTGAFGLLER YDSVLNTESV
AAFGQLEYKL DDRFTLIGGL RYSRDWKRFD YVHSENGVQD FAFDRRLFPD LAKRRFSDYS
GKIELDFKPS RNAFLYASVN RGTKSGGFGT QAFGPFDPAT IAFDGEVLTN VEGGVKLTLL
NRTTNFNVAG FHYKYSGYQS FELVGVTQII RNKPARIKGL EFEFTTRPVA GLYLQAFLTL
LDGEVRNVTV PSGDVLDRDM PQAPSLSAGG LIRYEFAAGP GRLALQTNWK HDSRQYFSTF
NAPVDREPAR WVGDARVSYA FDDLPIEAAF FVNNLTDRKY RLYTLDLSGP FGFTQQNYAR
PRWFGGSLTY RIQ
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