| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4616 |
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| Symbol | |
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| ID | 5198109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5079397 |
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| End bp | 5080047 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640584171 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001265092 |
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| Protein GI | 148557510 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0368196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGGGACG CGACCACGAC GACGACCGCG ACCGCGACCG GCCGGCGCTA CACGCAGGCG
CGGGGCCGCG CGCGGCGGGA GGCGCTGATC CAGGCCGCCC GCGATCTGCT GCAGGAGCGC
GAGATCGACG ACATCACCCT GCCGATGGTG TCGGAGGCGG CGAACATCCC GTCCAGCTCG
ACCTATCATT TCTTTCCCGA CCTGCGGGAA CTCTACAAGG AACTGGCGCG GACGATCTCC
GACGAGATGG CGAGCGTCGA GCCCGCGATC GGCGCCGACG CGTCGTGGCA GGCGATCATC
GGCACCTTCC TCGCCGCCTC GGCCGACTAT TTCAACGCCG ACGCGGCGGC GCGGCAGCTC
ATCCTCGGGC CGCGGACGAC GCCCGACATC CGCCAGGCCG GCTGCCATGA CGATTATCGT
TTCGGCGTGC AGCTCCACGC GGCGCTGGCC GCGCATTTCC ACCTGCCCGA ACTGGCCGAG
CCGATCGCGA TCTTCTTCCG CGCGATCGTC ATCGCCGACG CCTTCTTCGC GCTGTCGGTG
CTCGAGGACG GGGTCATCAC CCGCCACATG GTCGGCGAAG CGAGCCGCGC CGCCACCGCC
TATCTGGGCA ACTACCTGCC GCCGATCCTG CAGCGCAAGC GCAGCCACTG A
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| Protein sequence | MRDATTTTTA TATGRRYTQA RGRARREALI QAARDLLQER EIDDITLPMV SEAANIPSSS
TYHFFPDLRE LYKELARTIS DEMASVEPAI GADASWQAII GTFLAASADY FNADAAARQL
ILGPRTTPDI RQAGCHDDYR FGVQLHAALA AHFHLPELAE PIAIFFRAIV IADAFFALSV
LEDGVITRHM VGEASRAATA YLGNYLPPIL QRKRSH
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