| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4613 |
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| Symbol | |
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| ID | 5198106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5073675 |
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| End bp | 5075012 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640584168 |
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| Product | amino acid/peptide transporter |
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| Protein accession | YP_001265089 |
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| Protein GI | 148557507 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.196943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGTCG TTTCCCCCCT TTCGTCACCG GACGCGCCGG CGCTCTCCCC TGGAGGCGCC
GGCCGTACGC TGTTCGGTCA TCCGCCCGGT CTCACCAGCC TGTTCCTGAC GCAGATGTGG
GCCGAATTCT CCTATTTCGG CCTGCAGGCG CTGCTCGTCT ACTACATGAC CCGGCACCTG
CACTTCTCGC AGGGCCAATC CTCGCTGATC TATGGCCTCT ACGGCGCCGC GGCCTTCTTC
AGCCCCTTCG TCGGCGGGAT CGTTGCCGAC CGCTGGCTGG GGCGCACGCG CAGCGTGGTG
CTGGGTGGCG GGCTGATGAT GATCGGCCAT TTCCTGATGG CGTTCGAAGG CCTGCTCTTC
CCGGCGCTCG CCCTGGTCGC CGTCGGCAAC GGCCTGTTCA TCCCGCCGCT CGCCGTCCAG
GTGGGCGGCC TCTATGCGGA GGACGATCCC CGCCGGCCGC AGGCGTTCAG CGCCTATTAT
ATGGGGATCA ACCTCGGCGG GCTGCTGGCG CCGCTCGTCT GCGGGACGCT GGGCGAGCTC
TATGGCTGGC ACTGGGGCTT CTCCGCCGCC GGGATCGGCA TGGCGGTGGG GCTGGCGATC
TACCTCGGCA CGCTCCGCCT GCTGCCGCCC GACCCCGCGG CCGGCCGGAT CGGCGGCGCC
CGCCGGACGC CCCTCGACGC GGAGGACTGG CGCAAGCTCC GGCTGCTGCT CGGCATCGTC
CTGGTCATCG TCCTCTTCCG CATCGGCTAT GAGCAGAGCG GCAATGTGAT CGCGCTGTGG
GTCGACGAGC AGACCGACCG GCACGTCGCG CTGATGGGCC TGGATTTCGA GATACCGGCG
ACCTGGTTCC AGGCCGTCAA CCCGCTGCTG ATCATCCTGT TGACGCCGCC GCTGATCCGC
TTCTGGCGGC GGCACGATCG CGACGGCTCG CCCGCGGCGC TCCTGCGCCG GATGAGCCTC
GGCTGCGCGA TCGCGGCGGT GGCGATGCTG GTGATGGTCG GGGCGGCGGC GCTGTTCGGC
GCGACCGGCC GGCCGGTGGG GGCGGGCTGG GTGCTCGCCT ATTTCCTGTT CCTGACCCTC
GGTGAACTGC TGACCCTGCC GGTCGGCCTC AGCCTGATCG GGTTGCTGTC CCCGGTGCAG
ATCGCGGCGA TGCTGATGGG GGCCTGGTAT ATCGCGAAGT TCCTCGGCAG CCTGCTGGCC
GGGGTGATGG GCGCCTATTG GGGCGCGATC CCGGCCACCG CCTTCTTCGG GATCGGCGCG
ATATCGGTGC TCGCCGCGTC GGCGATCCTG CTGGCGATGA GCCGGCGCGA GCGAGCGCAC
CCGGCGGGAC GGAGCTGA
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| Protein sequence | MTVVSPLSSP DAPALSPGGA GRTLFGHPPG LTSLFLTQMW AEFSYFGLQA LLVYYMTRHL
HFSQGQSSLI YGLYGAAAFF SPFVGGIVAD RWLGRTRSVV LGGGLMMIGH FLMAFEGLLF
PALALVAVGN GLFIPPLAVQ VGGLYAEDDP RRPQAFSAYY MGINLGGLLA PLVCGTLGEL
YGWHWGFSAA GIGMAVGLAI YLGTLRLLPP DPAAGRIGGA RRTPLDAEDW RKLRLLLGIV
LVIVLFRIGY EQSGNVIALW VDEQTDRHVA LMGLDFEIPA TWFQAVNPLL IILLTPPLIR
FWRRHDRDGS PAALLRRMSL GCAIAAVAML VMVGAAALFG ATGRPVGAGW VLAYFLFLTL
GELLTLPVGL SLIGLLSPVQ IAAMLMGAWY IAKFLGSLLA GVMGAYWGAI PATAFFGIGA
ISVLAASAIL LAMSRRERAH PAGRS
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