| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4611 |
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| Symbol | |
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| ID | 5199081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5069286 |
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| End bp | 5071640 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640584166 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_001265087 |
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| Protein GI | 148557505 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATAA GGCTGAAGGC ATTCTGCCTG GCGGGCGCGG CGCTGGTCGC GGTCGCGCCG
GCGGCGGCCC AGCGGTCGGG GGCGGCCGAT GCGACGGCGC CGGGGGCGGA CGATCGGATC
GACGAGATCG TCGTGACCGC GCAGAAGCGC GAGGAGCGGC TGCTCGACGT TCCCCAGTCG
ATCTCGGTGG TGTCCAGCGC GACGCTCGAG CGGCAGCAGA TCAGGAGCAT CGCCGATTAT
GCTTCGCTGG TTCCCGGTCT CACCATCCAG CAGCAGACGC CGGGGCAGGC CCGCGTCGTC
CTGCGCGGCA TCAACACCGG CGGGGCGAGC CCGACCGTCG CCATCTATGT CGACGACACG
CCGTTCGGGT CGAGCACCGG CCAGAGCAAC GCGGCCTATC TGGCGGGCGA CATCGATACG
TTCGACGTCG AGCGGATCGA GGTGCTGCGC GGGCCGCAGG GTACGCTCTA CGGCGCCAAT
TCGCTGGGCG GCGTCGTCAA ATATGTCACC GCCGGCCCCA AGCTCGACCG GCTCGAAGGG
AAGGCCCAGG CCGGTCTCGA AACGGTCAAG GGCGGGAATC TGGGCTGGTC GGCCAACGCC
GCGGTCAACG TGCCGCTGTC CGGCAAGATC GCCGTGCGGG CGAGCGGCTT CTATCGCCGG
ACCGGCGGCT TCATCGACAC GCTGGGCCTG GCGCGCCGCG ACGCCAACGA CGTCGACAGC
TATGGCGGCC GCGGCTCGAT CCTGCTGCAG CCGACCGAGA CGCTGACGGT CCGCCTGTCG
GCGCTCGCCC AGAATCTGCG CAGCGATTCG CGCGCCATGT ACGATGCCGA TCCGGTCACG
CTGGCGCCCC AGGCGACCGA TCCCAGCACC GGCGCGCCGG TGTCGGGCCT GACCCGCACC
GAATTCTATG CCGAGAAGAC CGGCGTCGAC TATCGCCTCT ACAACGGCAC GCTCGACTGG
GACGCGGGGT TCGCCACCCT GACCTCGGTG ACGAGCTACG GCCGGCTCTT CTCGAACGAC
GTCGGCGACG TCAGCTATCA GCTTCCCGGC ATCGGCGACG CGGTCTTCGG CACCGGGCCC
AACACGCGCG GCCTGTTCTT CCCGACGCAG ATCACCCAGA AGAAGTTCAC CCAGGAACTG
CGCCTGGCAT CGCCGGACAA TGATCGGCTC GAATGGCTGG TCGGCGGCTA TTACACGCAT
GAGAAGGGCC GGATATTCCA ACGATATCTG CCCTTCGACC TCGCCACCGG CAAAGCCGTC
GACCAGACGC TCGTCCTGCC GGTGGGGCCG GGCGGCGCGG ACGTCACCTT TCCCGATTTC
CTGGTCGCGA ACCTTGCCTC GGTCTACAAG GAATATGCCG GCTTCGGCAG CGCCACCTGG
CATGTCGGCC CGCGCCTCGA CCTGACCGGC GGCGTCCGCT ACAGCCATAA CCGGCAGAGC
ACGGTCCAGA GCCTCGACGG GTCCTTCCTG CCGCTTTCGG GCGCGCCGAT CGGGCCCGAC
ACGAGCCGCG GGCGATCGTC GGAGAATGTC TTCACCTGGT CGGTCTCGCC GCGTTTCGAA
CTGGGCGACC ATGCATCGAT CTATGCGCGG GCGGCGAAGG GCTATCGGCC GGGCGGCCCG
AACGTCGTGC CGCCGGGGGC TGGACCGGAC TTCCCGCGCC GGTTCGAGGC CGATACGCTG
ATCAGCTATG AACTGGGCCT GCGCGCCGAA ACCCCCGGTC ACGGCTTCTC GGTCGACGCG
TCGGTCTATT ATCTCGACTG GCGCAACATC CAGACCACGG TCACCTATCA GACCAGCCTC
GGCCCGGTGA CCGGCGACGG CAATGGCGAC AAGGCGCGCA GCAAGGGGGC GGAGATCACC
GTCACCGCGC GGCCCGCGCG CGGCTTCGAC CTGACGGCGA GCATCGCCTA TAGCGACGCC
AAGCTGAAGG ACGACCTGCC CGGCATCGAC ATCGGCGCCC CGGCGCTCAT ATCCCCGGGG
CTGAAGGGCG ACCGGCTTCC TTATGCGCCG GAATGGACGG TCGACCTGTC GGGCGACTAT
CGCTGGTCGA TCGGCGGCGA CGCCGAGGCC TTCGTCGGCG GCAATATCCG GCTGATCAGC
GACCAGGCGA CCGATTTCGA CCTGGCCTAT CGGCTGACCT ATGGCCGCCG CCTGACGATC
GACGGCTATG CCACCGCCGA TCTGCGCGCC GGTATCGAGA CCGGACGGTT CAACCTCCAG
TTCCAGGTCC GCAACCTCAC CAATTCGCGT GGCCTGATCA ACGCGGGCCG GTTCCAGACA
CGGCCGGGCA CGCTGGTCAA CGCCTCTCCG ATCCGGCCAC GCAGCTTCGG CGTCACCTTG
GGAGCCTCCT TCTGA
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| Protein sequence | MAIRLKAFCL AGAALVAVAP AAAQRSGAAD ATAPGADDRI DEIVVTAQKR EERLLDVPQS
ISVVSSATLE RQQIRSIADY ASLVPGLTIQ QQTPGQARVV LRGINTGGAS PTVAIYVDDT
PFGSSTGQSN AAYLAGDIDT FDVERIEVLR GPQGTLYGAN SLGGVVKYVT AGPKLDRLEG
KAQAGLETVK GGNLGWSANA AVNVPLSGKI AVRASGFYRR TGGFIDTLGL ARRDANDVDS
YGGRGSILLQ PTETLTVRLS ALAQNLRSDS RAMYDADPVT LAPQATDPST GAPVSGLTRT
EFYAEKTGVD YRLYNGTLDW DAGFATLTSV TSYGRLFSND VGDVSYQLPG IGDAVFGTGP
NTRGLFFPTQ ITQKKFTQEL RLASPDNDRL EWLVGGYYTH EKGRIFQRYL PFDLATGKAV
DQTLVLPVGP GGADVTFPDF LVANLASVYK EYAGFGSATW HVGPRLDLTG GVRYSHNRQS
TVQSLDGSFL PLSGAPIGPD TSRGRSSENV FTWSVSPRFE LGDHASIYAR AAKGYRPGGP
NVVPPGAGPD FPRRFEADTL ISYELGLRAE TPGHGFSVDA SVYYLDWRNI QTTVTYQTSL
GPVTGDGNGD KARSKGAEIT VTARPARGFD LTASIAYSDA KLKDDLPGID IGAPALISPG
LKGDRLPYAP EWTVDLSGDY RWSIGGDAEA FVGGNIRLIS DQATDFDLAY RLTYGRRLTI
DGYATADLRA GIETGRFNLQ FQVRNLTNSR GLINAGRFQT RPGTLVNASP IRPRSFGVTL
GASF
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