| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4604 |
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| Symbol | |
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| ID | 5198790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 5057508 |
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| End bp | 5062169 |
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| Gene Length | 4662 bp |
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| Protein Length | 1553 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640584158 |
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| Product | glutamate dehydrogenase (NAD) |
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| Protein accession | YP_001265080 |
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| Protein GI | 148557498 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACCG AGACGGCCAG GCGCACGGCT TCGGACAAGC ACGAATTCAC CGACATCTTC
GCCAAGGCCC TGACCAGCGG CGCCCTTCCG GGCGAACTTG CCGGCCTCGA CGGCGAACCC
CTCGAAAAGG CAGCGGCCTT CCTGGCCCAC ACCGCGCGGC GGCGACAGCC CGGCCATGCC
GCGATCGCGG TACAGACGAT CGCGGGCAAT GTCGGCGGCA GCCGGCTGAT GCGGATCGCC
GTCGTCAACG ACGACATGCC CTTCCTGGTC GACTCGGTCT CCGCCGCGCT CGCCACGCAG
GGCGTCGAGG TCCGTCGCCT GCTCCACCCC GTCATCGCGG TCCGCCGCGA CGAGGACGGC
GCGCTCACCG CCGTGCTGCC GCAGGGATCG ACCGGCGAGC GGCGCGAATC CTTCATCTAT
CTCGAAGCCG AGCGGGTCGA CGCCCGCGAA CGGCAGGCGC TCGCCCAGGC GATCGAAGCG
GTGCTCGAAG ACGTCCGCGC CGCGGTGCGC GACTGGCAGG CGATGCAGAT CGCGATGCGC
GACGACGCCG AGGGACTGCC CGACGGCGAG GGAGCGGCGC TGCTGCGCTG GCTGCTCGAC
CAGAACCTCA CCCTGCTCGG CCATCACGTC GCCATGGCGA AGGGCGAGCC GCGCGACCGG
CTCGGCATCC TGCGCGTCGG CAGCCGCAAG CTGTGGCGCG ATTCCACCGC GAAGGCGGCG
ATCGCCTGGT TCGAGAAGGG CGGCGCGGCG CCGCTGCTGC TCAAGTCCGA TTGCCGGTCG
ACCGTCCACC GCCGCGCGCC GCTCGACCTG ATCGTCACCC CGGTGCGGCA GGGCAAGGAC
GTCACCGGCC TGTCGATCCA CGCCGGCCTG TGGACCAGCG CCGCGCTGCG CACCCTGGCC
GAGGACATCC CGGTGCTGCG CAGCCGCCTC ACCGCGATCG AGGAGCGACT GGGCTTCGAC
CCGAAGGGCC ATGCCGGCAA GGCGCTGCAC CATGCGCTGT CGGAACTGCC GCCCGACCTC
GTCCTGGCGC TGCCACTCGA CTCGCTGGAG AAGGTGGTGC TGACCGCGAT GTCGCTGGTC
GATCGCCCGC GCCCGCGGCT CGAACTGGTG CGCAGCACGC TGGGCGAGCA TCTGGTCGCG
ATCGTCTGGC TGCCGCGCGA GCTGCTGACC ACCGGCCGCC GCGTCGCGAT CGGCGAGATG
CTGGCCCAGG CGTCGGGCGC GACCCTGTCC AACTGGTCGC TCCAGCTCGG CGAGGGCGAC
ATCGCCCAGA TCCGCTACAT GCTCGACCTG CCGGCCGGCG GCACGGTGCC CGACAACGAG
CCGCTCGACC GGCGGCTGTC CGAGATGCTG CGCGGCTGGG AGCCCGCGGT CGAGGCGCAG
CTCGCCGAGA TGGAGGCGGG CAACCGCGCG GTGCGGCTGA CGCTCGACTA TGCCGCCGCC
TTCCCGATCG CCTACCGCAC CCATTCGACC CCGGCCGAGG CCGCGACCGA TATCCTGCGG
CTCAACGCGC TGGGCGACGG CGCGGCGCGC GGCTGCCGCC TCTATCGCGG CGAGCATGAT
CCCGACCATC GCCTGCGGCT GAAAATCTAT CGGCGCGGCG CGCTGATCCC GCTGTCCGAG
GCGGTGCCGG TGCTGGAGAA TTTCGGCTTC CGCGTGATCG AGGAGATCCC GACCCCGCTC
GACGGCGGCG CGATCGGCTA TATCCACGAG TTCAAGCTCG ACCTGCCCGA TGCCGATACC
GCCAGCCGGC TGATCGAGCA TAGCGCGGTC GCCGAGGAGT CGATCGCCGC GACCCTCGAA
GGGCGCGCCG AGAACGACCT GTTCAACGAG TTGATCGTCT CGGTCGGCCT GTCGCCGGAC
GAGGCGCTGC TGTTCCGCGC CTGGTTCCGC TACCTGCGCC AGACCGGCTT CGCCTATGGC
CTCGCCACTG CGGTCGAGGC GCTCAAGAAG GCGCCGGACG TCGCGCGCGG CATCATCGCC
TATTTCCGCG CGCTGCATCA CCCGACCCGC AACGACGCGG CCGAGGCGGA GCGCCTCCAT
GCCGAGATCG AGACCGGCCT GAAGAAGGTG ACGGCGATCG ACGACGATCG CATGCTGCGC
CGCTTCCGCG CCGTCGTCCG CGCGACGCTG CGCACCAACG CCTTCTCCCC CGCCGCCAAG
GAAGCGCTCG CCTTCAAGAT CGATTCGAGC GGCGTCCCCG GCCTCCCCGC GCCGGTGCCG
TGGCGCGAGA TCTGGGTCTA CAGCCCGCGC GTCGAGGGCA TCCACCTGCG CGGCGGGCCG
ATCGCGCGCG GCGGCCTGCG CTGGTCCGAC CGGCGCGACG ACTTCCGCAC CGAGATCCTC
GGCCTGATGA AGGCGCAGGT CGTCAAGAAC GCGGTGATCG TGCCGACCGG CGCGAAGGGC
GGCTTCTACC CGAAGCAGCT CCCCTCCCCG TCCGATCGCG ACGCCTGGCT GGCGGAAGGC
ACCGAAAGCT ATCGCGTGTT CATCCGCTCA CTGCTGTCGG TCACCGACAA TATCGTCGAG
GGCAAGGTCG TCCATCCGCC CAAGGTGGCG ATCCGCGACG GCGACGATCC CTATTTCGTC
GTCGCCGCCG ACAAGGGCAC GGCGACCTTC TCCGACGTCG CCAACGCGAT CGCGGTGGAG
CGCGGCTTCT GGCTGGGCGA CGCCTTCGCC AGCGGCGGCA GCCATGGCTA TGACCACAAG
GCGATGGGCA TCACCGCGCG CGGCGCCTGG GTCTCGGTCC AGCGCCATTT CGCCGAGATG
GGCGTCGACG TGCAGAATGA TCCGGTCCGC GTCGTCGGCT GCGGCGACAT GTCGGGCGAC
GTGTTCGGCA ACGGCATGCT GCTGTCGAAG TCGATCCGCC TGGTCGCGGC GTTCGACCAT
CGCCACATCT TCCTCGACCC CGATCCCGAT GCGGCGACCG GCTGGGAGGA GCGCAACCGC
CTGTTCGCCC TGCCCCGGTC GAGCTGGGCC GATTATGACG CCAAGCTGAT CTCGAAGGGC
GGCGGCATCT TCCCGCGCGA CCAGAAGGAG ATCCCGATCT CCCCGCAGAT CCGCGAGGCG
CTCGACATCG CCGACGAGGT GCTCGATCCC TCCGCGCTGA TCGCGGCGAT CCTCAGGAGC
CCGGTCGACC TGCTGTGGTT CGGCGGCATC GGCACCTATG TGAAGGCGAA GTCGGAGACC
AACGCCGAGG TCGGCGACCG TTCGAACGAG GCGCACCGCG TGAACGGCGA GGACGTCCGC
GCCCGGGTGG TCGGCGAAGG CGCCAATCTG GGCGTGACCC AGGCGGGCCG CATCGCCTTC
GCGATGAAGG GCGGCCGGAT CAACGCCGAC TTCATCGACA ATTCGGCGGG CGTCGACTGC
TCGGACAACG AGGTCAACAT CAAGATCGCG CTCAACCGCG AGATGCTCGA AGGCCGGCTG
GAGTTCGACA AGCGCAACGC GCTGCTCGTC AAGATGACCG ACGACGTCGC GCATATCGTG
CTGGAGGACA ACCGCCTGCA GACGCTGGCG CTGTCGCTGG CCGAACGCGG CGGGGCCGAG
GCGATGCCCG CGCAGCTTCG CGTCATCGAG ATCCTGGAGG AGAATGGCCG CATCAACCGC
GCGGTCGACG GCTTCGACAG CAACGACATG CTGCTGCGCC GCGCGCAGGA GCATCTCGGC
CTGACCCGGC CCGAGCTGGC GGTGGTGCTG TCGCACGGCA AGCTGGCGCT GCAGGACGCG
ATCGAGAACA GCGACCGCAC CGGCGATCCG ATGCTCGCCC CGCTGCTGCT GGCGGCCTTC
CCGCCGGCGA TGCAGAAGGG CTTCGCCGAC GCGATCGAGG CGCATCGCCT GCGTCCGCAG
ATCCTGGCGA CCAAGATGTC GAACCGGGTG ATCAACCGGC TGGGCCTGGT CGCGCCGTTC
GAGATGGCCG AGGAGGAAGG CTGCTCGCTG GCGCAGGTGG CGACCGCCTA TTTCACGGTC
GACGCGCTGT TCGGGCTCGA AGCGCTGTTC ATGCGGATCG AGCAGGCCGC GATCGGCGAG
CAGGCGCGGC TGACGCTGCT CGCCGCGCTG GCCGAGATCG CGCGCGGCCA TGTCGCCGAC
CTGCTCCGCA GCATCGCGGC GGAGACCGAC ATCGGCACGA TGGTGGCGAT GCTGAAGCCC
GGCCTCGCCC GGCTCGACGA CGCCCGCGCC GACCTGATCC GCAGCGAGGC GCGCCAGCAG
TCCGACCAGC TCCGCCAACG CATCACCGCC GAGGACGTCG ATCCCGCGCT GATCGACGCG
GTCGTCGAGA TCGCCGAGAT CGACGGCGCG ATCGGCACGG CCGCGCTCGC CAGCGAGCTT
TCGGCCGACG AGGTCGACGT CACCCGCGCC TATGTGGTGC TGGGCGAGGC GCTGGGGCTC
GACTGGGCCA AGGCCGCGGC GGCGCGCTTC CGCAGCGCGG ATGCCTGGGA ACGGCTGCTG
ATCGCGGGGC TGACCCGCGA GTTCGGCCAG ATCCGCCTCG ACTTCCTGGC GCGGCACGGC
GGCAAGGGCC CCGGCGAGGC GGTCACCGCC TGGCTGGAGA CCCATCGCGA CCGGGCCGAG
CAGTTCCGCC AGACGGTCGG CCGCGCCCGA TCGGCGGCGG CCCCGACCGC GGCGATGCTG
GCGCAGATCG CAGCACAGGC CCGCTCGCTG CTGATGCGGT GA
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| Protein sequence | MDTETARRTA SDKHEFTDIF AKALTSGALP GELAGLDGEP LEKAAAFLAH TARRRQPGHA
AIAVQTIAGN VGGSRLMRIA VVNDDMPFLV DSVSAALATQ GVEVRRLLHP VIAVRRDEDG
ALTAVLPQGS TGERRESFIY LEAERVDARE RQALAQAIEA VLEDVRAAVR DWQAMQIAMR
DDAEGLPDGE GAALLRWLLD QNLTLLGHHV AMAKGEPRDR LGILRVGSRK LWRDSTAKAA
IAWFEKGGAA PLLLKSDCRS TVHRRAPLDL IVTPVRQGKD VTGLSIHAGL WTSAALRTLA
EDIPVLRSRL TAIEERLGFD PKGHAGKALH HALSELPPDL VLALPLDSLE KVVLTAMSLV
DRPRPRLELV RSTLGEHLVA IVWLPRELLT TGRRVAIGEM LAQASGATLS NWSLQLGEGD
IAQIRYMLDL PAGGTVPDNE PLDRRLSEML RGWEPAVEAQ LAEMEAGNRA VRLTLDYAAA
FPIAYRTHST PAEAATDILR LNALGDGAAR GCRLYRGEHD PDHRLRLKIY RRGALIPLSE
AVPVLENFGF RVIEEIPTPL DGGAIGYIHE FKLDLPDADT ASRLIEHSAV AEESIAATLE
GRAENDLFNE LIVSVGLSPD EALLFRAWFR YLRQTGFAYG LATAVEALKK APDVARGIIA
YFRALHHPTR NDAAEAERLH AEIETGLKKV TAIDDDRMLR RFRAVVRATL RTNAFSPAAK
EALAFKIDSS GVPGLPAPVP WREIWVYSPR VEGIHLRGGP IARGGLRWSD RRDDFRTEIL
GLMKAQVVKN AVIVPTGAKG GFYPKQLPSP SDRDAWLAEG TESYRVFIRS LLSVTDNIVE
GKVVHPPKVA IRDGDDPYFV VAADKGTATF SDVANAIAVE RGFWLGDAFA SGGSHGYDHK
AMGITARGAW VSVQRHFAEM GVDVQNDPVR VVGCGDMSGD VFGNGMLLSK SIRLVAAFDH
RHIFLDPDPD AATGWEERNR LFALPRSSWA DYDAKLISKG GGIFPRDQKE IPISPQIREA
LDIADEVLDP SALIAAILRS PVDLLWFGGI GTYVKAKSET NAEVGDRSNE AHRVNGEDVR
ARVVGEGANL GVTQAGRIAF AMKGGRINAD FIDNSAGVDC SDNEVNIKIA LNREMLEGRL
EFDKRNALLV KMTDDVAHIV LEDNRLQTLA LSLAERGGAE AMPAQLRVIE ILEENGRINR
AVDGFDSNDM LLRRAQEHLG LTRPELAVVL SHGKLALQDA IENSDRTGDP MLAPLLLAAF
PPAMQKGFAD AIEAHRLRPQ ILATKMSNRV INRLGLVAPF EMAEEEGCSL AQVATAYFTV
DALFGLEALF MRIEQAAIGE QARLTLLAAL AEIARGHVAD LLRSIAAETD IGTMVAMLKP
GLARLDDARA DLIRSEARQQ SDQLRQRITA EDVDPALIDA VVEIAEIDGA IGTAALASEL
SADEVDVTRA YVVLGEALGL DWAKAAAARF RSADAWERLL IAGLTREFGQ IRLDFLARHG
GKGPGEAVTA WLETHRDRAE QFRQTVGRAR SAAAPTAAML AQIAAQARSL LMR
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