Gene Swit_4599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4599 
Symbol 
ID5198052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5053768 
End bp5054490 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content67% 
IMG OID640584153 
Product3-oxoacyl-[acyl-carrier-protein] reductase 
Protein accessionYP_001265075 
Protein GI148557493 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGGG TTGCGATCGT TACCGGTGGA ACCAGGGGTA TCGGCGAGGC GATCAGCCTG 
GCGCTCAGGG ACGCGGGCGT CGCCGTCGCG GCCAACTATG CGGGCAATGA GGAACGGGCC
AGGGCCTTCA CCGAGAAGAC CGGCATCCGC AGCTACAAAT GGGACGTCGC CGACTATGAC
GCCTGCCACA AGGGCGTCGA GCAGGTCGAG GCCGAGCTGG GCCCGGTCGA CATCGTCGTC
AACAATGCCG GCATCACCCG CGACGGCACG CTGCTCAAGA TGACCTACCA GGATTGGAAG
GACGTCATGG ACACCAATCT GGGCGGCTGC TTCAACATGG CGAAGTCGAC CTTCCCCGGC
ATGCGCGCGC GCGGCTGGGG CCGGATCGTC AACATCGGTT CGATCAACGG CCAGGCCGGC
CAGTACGGCC AGGTCAACTA TGCCGCCGCC AAGTCGGGCA TCCACGGCTT CACCAAGGCG
CTGGCGCAGG AAGGCGCCAA GTCGGGGGTG ACCGTCAACG CGATCGCGCC GGGCTATATC
GACACCGACA TGGTCGCCGC GGTGCCGCAG GACGTGCTCG CCAAGATCGT CGCCAAGATC
CCGGTCGGCC GTCTCGGCCA TGCCGAGGAG ATCGCGCGGG GCGTGGTGTT CCTGTGCGGC
GAGGAAGCGG GCTTCGTCAC CGGGTCGACG CTGTCGATCA ACGGTGGCCA GCACATGTAC
TGA
 
Protein sequence
MARVAIVTGG TRGIGEAISL ALRDAGVAVA ANYAGNEERA RAFTEKTGIR SYKWDVADYD 
ACHKGVEQVE AELGPVDIVV NNAGITRDGT LLKMTYQDWK DVMDTNLGGC FNMAKSTFPG
MRARGWGRIV NIGSINGQAG QYGQVNYAAA KSGIHGFTKA LAQEGAKSGV TVNAIAPGYI
DTDMVAAVPQ DVLAKIVAKI PVGRLGHAEE IARGVVFLCG EEAGFVTGST LSINGGQHMY