Gene Swit_4580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4580 
Symbol 
ID5197509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5038320 
End bp5038979 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content75% 
IMG OID640584134 
ProductGcrA cell cycle regulator 
Protein accessionYP_001265056 
Protein GI148557474 
COG category[S] Function unknown 
COG ID[COG5352] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTGGA CGGAAGAACG GATAGACCAG CTCAAGCGCC TGTGGGGGCA GGGGATGACG 
GCGAGCCAGA TCGCCGACGA GCTGGGCGGC GTCAGCCGTA ACGCGGTGAT CGGCAAGGCC
CATCGCCTCG GCCTTGAGGC GCGTCCCTCC CCGGTGAAGG GCGGCGATGC CGCCGCATCG
GGCGGCGCCA GCGCCGCCGC CGCGACGCCC GCCCCCGAAA AGGCGGCCGC GCCGCCGCCG
CGCCCGGCCC CGACGCCCGC CCCGGCCCCG GTGTCGCCGC CCCCGGCCGC TGCCGCTCCG
GCCCCTGCGC CGACGACGCC GCAGCCGATC GTCCGCTCGA TCGGCCCGGG CGGTTTCCAG
CGCCAGTCGC CCGGCGAGCA GAGCAGCCCG ATCCCGCCGG CGCCGCCGCG CCGCCTGGTC
CCCGCCAAGC CTTCGGCGGA GATGGCGGAC AAGACCAGCC TGCTCGAACT CAACGACAAG
GTCTGCAAAT GGCCGCTCGG CCATCCGGGC GAGCCGGACT TCCATTTCTG CGGCGATCCG
ATCAACCCCG GCTTCCCCTA TTGCCTCGAG CATTGCTCGG TCGCCTATCA GGCGCAGCTG
CCGCGCCGCG ACCGCCGGCC GCCGCCGCCC TTGCCCTTTG GCGGTCCGCG CGTCAGATAA
 
Protein sequence
MSWTEERIDQ LKRLWGQGMT ASQIADELGG VSRNAVIGKA HRLGLEARPS PVKGGDAAAS 
GGASAAAATP APEKAAAPPP RPAPTPAPAP VSPPPAAAAP APAPTTPQPI VRSIGPGGFQ
RQSPGEQSSP IPPAPPRRLV PAKPSAEMAD KTSLLELNDK VCKWPLGHPG EPDFHFCGDP
INPGFPYCLE HCSVAYQAQL PRRDRRPPPP LPFGGPRVR