| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4578 |
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| Symbol | |
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| ID | 5197507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 5035920 |
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| End bp | 5037902 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640584132 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_001265054 |
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| Protein GI | 148557472 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.941273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACG ATCTCTTCGC CTCCGCGCCG TCCACCAGTT CCGGAAATTA TGACGCCTCG
GCCATCGAGG TGCTGGAAGG GCTCGAACCC GTCCGGCGCC GGCCCGGCAT GTATATCGGC
GGCACCGACG AGCGCGCCTA TCACCACCTC GCCGCCGAGG TGCTCGACAA TGCGATGGAC
GAGGCGGTGG CGGGCCATGC GAACCGGATC GAGGTGTCGC TGCAGGTCGG CAACCGCCTG
ACCGTGATCG ACAACGGCCG CGGCATCCCG GTCGATCCGC ATCCGAAATT CCCCGGCAAG
TCGGCGCTCG AGGTGATCCT GAGCACGCTC CATTCGGGCG GCAAGTTCAG CGACAAGGCC
TATGCCACCT CGGGTGGCCT GCACGGCGTC GGCGTGTCGG TGGTGAACGC GCTGTCGACC
GAGACGGTGA TCGAGGTCGC CCGCAACAAG GAGCTGTTCC GCCAGCGCTT CTCGCGCGGG
ACCACGCTGG GCCCGATCGA GAAGCTGGGC GCGGCGCCCA ACCGGCGCGG CACCAGCGTC
TCCTTCACCC CCGATCCCGA GATCTTCGGC CCGAGCGCGC ATTTCCGGCC GGGCCGGCTG
ATGCGGCTCG CCCGGTCGAA GGCCTATCTG TTCGCGGGGG TCGAGATCCG CTGGAAATGC
GATCCCTCGC TGATCGGCGA CGACACCCCG TCCGACGCGG TGTTCCAGTT CCCCGGCGGC
CTGTCCGATC ATCTGCGCGA GCAGATCGGC GATCGCGAAT GCGCGACCAG CCAGTTCTTC
TCGGGCAAGC AGGATTTCGC CGACGGCCAG GGATCGGTCG AATGGGCGGT CGCCTGGCCG
CTCTGGTCCG AGGGCTCGTA CAGCTATTAT TGCAACACCA TCCCGACCCC CGACGGCGGC
ACCCATGAGA CCGGCCTGCG CGCCGCGCTG GTCAAGGGCA TCCGCGGCTT CGCCGAACTG
GTCGGCAACA AGCGCGCCAA GGACGTCACC GCCGACGACG TCGTCACCGG CTCCGAACAG
ATGCTGTCGG TGTTCATCCG CGATCCGCAA TTCCAGAGCC AGACCAAGGA CCGGCTGACC
TCGCCCGACG CCGCGCGGCT CGTCGAGAAT GCGGTGCGCG ACCATTTCGA CCATTTCCTC
GCCGACAATA TGGAGCGCGG CAAGGCGCTG CTCGCCTTCG TCCTCGACCG GATGGACGAT
CGCCTGCGCC GCAAGGCCGA ACGCGACATC AAGCGCAAGA CCGCGACCTC GTCGCGCAAG
CTGCGCCTGC CCGGCAAGCT CACCGACTGC GCGAACGACT CGCCCGAAGG GACCGAGATG
TTCATCGTCG AGGGCGACTC GGCCGGCGGA TCGGCCAAGC AGGCGCGCGA CCGCAAGACC
CAGGCGATCC TCCCGATCCG CGGCAAGATC CTGAACGTCG CCTCCGCCAA CAGCGCGAAG
ATCGGCGCCA ACCAGGAAAT CGCCGATATC ATCCAGGCGC TCGGCTGCGG CAGCCGCGAC
AAGTGCAATG TCGATCTGCT GCGCTACGAG CGGATCGTGA TCATGACCGA CGCCGACGTC
GACGGCGCCC ATATCGCGAC CCTGCTGATG ACCTTCTTCT TCCAGGAGAT GCCCGACCTC
GTCCGCGAAG GGCATCTCTA TCTCGCACAG CCGCCGCTCT ATCGCCTGAC CGCGGGCACC
AAGAGCCTCT ACGCCCGCGA CGATGAGCAT CGCGCCGAGA TCGAGGCGAA CGAATTCAAG
GGCAAGAAGG TCGAGGTCGC GCGCTTCAAG GGCCTGGGCG AGATGAACCC GCAGCAGCTT
CGCGAGACGA CCATGGACCC GGCGACCCGC ACCCTGCTGC GCGTCACCCT GCCCCAGGAA
TATGAGGAGC GCGCCAGCGT CCGCGACCTC GTCGACCGGC TGATGGGCAA GAACCCCGAG
CACCGCTTCG CCTTCATCCA GGCCAATGCG GCCAGCGTCG ATGACGAAGA GATTGATGTG
TAG
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| Protein sequence | MSDDLFASAP STSSGNYDAS AIEVLEGLEP VRRRPGMYIG GTDERAYHHL AAEVLDNAMD
EAVAGHANRI EVSLQVGNRL TVIDNGRGIP VDPHPKFPGK SALEVILSTL HSGGKFSDKA
YATSGGLHGV GVSVVNALST ETVIEVARNK ELFRQRFSRG TTLGPIEKLG AAPNRRGTSV
SFTPDPEIFG PSAHFRPGRL MRLARSKAYL FAGVEIRWKC DPSLIGDDTP SDAVFQFPGG
LSDHLREQIG DRECATSQFF SGKQDFADGQ GSVEWAVAWP LWSEGSYSYY CNTIPTPDGG
THETGLRAAL VKGIRGFAEL VGNKRAKDVT ADDVVTGSEQ MLSVFIRDPQ FQSQTKDRLT
SPDAARLVEN AVRDHFDHFL ADNMERGKAL LAFVLDRMDD RLRRKAERDI KRKTATSSRK
LRLPGKLTDC ANDSPEGTEM FIVEGDSAGG SAKQARDRKT QAILPIRGKI LNVASANSAK
IGANQEIADI IQALGCGSRD KCNVDLLRYE RIVIMTDADV DGAHIATLLM TFFFQEMPDL
VREGHLYLAQ PPLYRLTAGT KSLYARDDEH RAEIEANEFK GKKVEVARFK GLGEMNPQQL
RETTMDPATR TLLRVTLPQE YEERASVRDL VDRLMGKNPE HRFAFIQANA ASVDDEEIDV
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