| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4572 |
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| Symbol | |
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| ID | 5198010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 5030294 |
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| End bp | 5030932 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640584126 |
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| Product | isochorismatase hydrolase |
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| Protein accession | YP_001265048 |
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| Protein GI | 148557466 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.333323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.445103 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGCG AAGCCATCCG CGATCCGAAG ACCGATCACC TGCTCACGCC GCAGAATGCC
GCCTTCATCA TCATCGACTA TCAGCCGGTG CAGGTGAACT CGATCGCCTC GATGGACCGC
CAGTTGCTGC TCAACAATAT CGCCGGCTGC GCCAAGGCGG CGGTCGTCTA CGATCTTCCG
GTCATCCACT CGACGGTGAA CGTCGAGACG GGCCTCAACA AGCCGCCGGT CCCGCAGGTC
CGCAAGGTGC TCGGCGACTA TCCGACCTAT GACCGCACCA CCATCAACAG CTGGGAGGAC
GTCGAATTCC GCCAGGCGGT CGAGGCGACC GGCCGCCGGA AGCTGATCAT GACCGCGCTG
TGGACCGAGG CCTGCCTGAC CTTCCCGGCG CTCGACGCGC TCGCCGAGGG CTATGAGGTC
TATGTCCCGG TCGACGCGGT CGGCGGCACG TCGGTCGCGG CCCATGAAGC GGCGCTGCGC
CGTATCGAGC AGGCCGGCGG CAAGATGATC TCGGTGGCGC AGCTCTTCTG CGAACTCCAG
CGCGACTGGA AGCGCAGCGA GACCGTCCCC GCCTTCATGA ACCTGTTCAT CGAGACCGGC
GGCACCGCCG GCATCCAGTT CGGCTATGAC AAGGCCTGA
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| Protein sequence | MTSEAIRDPK TDHLLTPQNA AFIIIDYQPV QVNSIASMDR QLLLNNIAGC AKAAVVYDLP
VIHSTVNVET GLNKPPVPQV RKVLGDYPTY DRTTINSWED VEFRQAVEAT GRRKLIMTAL
WTEACLTFPA LDALAEGYEV YVPVDAVGGT SVAAHEAALR RIEQAGGKMI SVAQLFCELQ
RDWKRSETVP AFMNLFIETG GTAGIQFGYD KA
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