Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4570 |
Symbol | |
ID | 5198008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 5029090 |
End bp | 5029980 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640584124 |
Product | pirin domain-containing protein |
Protein accession | YP_001265046 |
Protein GI | 148557464 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.203406 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.316672 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAA TGGTGATCGA GCAGCGCCGT CGCAGCCTGG GCGGCGGGCT CGAGGTCGGC CGGGTGCTGC CCTTCGCGAA GCGGCGGATG GTCGGCCCCT TCATATTCTT CGACCATATG GGGCCGCTCG ACGTGGCGGC CGGGGCCGAT CGCAGCCTCG ACGTGCGGCC GCACCCGCAT ATCGGCCTCT CGACCGTGAC CTATCTGTTC TCGGGCGAGA TCATGCACCG CGACAGCGTC GGGTCCGAGC AGGCGATCCG GCCTCGGGAA GTCAACTGGA TGACCGCGGG CAGCGGCATC ACGCATAGCG AGCGGTTCGA GAAGGCGCGC GCCTCGGGCG ATCATCTCCA CGGCATCCAG GCCTGGGTGG CGCTGCCGAC GGCGGACGAG GAGACCGCGC CGAGCTTCTC CCACCATGCC GGCGCGGACC TGCCGCACTG GAACGACGGC GGGGTGGCGG GGCACCTGAT CGCCGGGAGC GCCTATGGGC TGACGGCGGC GGCGCGGACC CATTCGCCGC TCTTCTACGC GCATCTCGAC ATGGAGCCGG GCGCGACCGC CGAGGTCCCG GCCGGCCATC CCGAACGCGC GCTCTACGTC GCCACCGGCG CTGTCGAGGT CGACGGCGCG CGCTACGATG CCGGCAAGAT GCTCGTCCTC GGCGCGGACG TGTCGGCGTT GCGCGCCGTC GAGCGTTCCG CGGTGATGCT GCTCGGCGGC GAACCGGTCG GCGAGCGCTA TCTCTACTGG AACTTCGTCT CCTCGTCGCA CGACAGGCTG GCGCAAGCGG CCGAAGACTG GAAGGCGGGC CGCATGAAGC TTCCCGACGC CGACGATCAG GAGTTCATTC CGCTCCCCGA CGCCCCCCTG CCCACGCCGG CGAAGGCCTG A
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Protein sequence | MIEMVIEQRR RSLGGGLEVG RVLPFAKRRM VGPFIFFDHM GPLDVAAGAD RSLDVRPHPH IGLSTVTYLF SGEIMHRDSV GSEQAIRPRE VNWMTAGSGI THSERFEKAR ASGDHLHGIQ AWVALPTADE ETAPSFSHHA GADLPHWNDG GVAGHLIAGS AYGLTAAART HSPLFYAHLD MEPGATAEVP AGHPERALYV ATGAVEVDGA RYDAGKMLVL GADVSALRAV ERSAVMLLGG EPVGERYLYW NFVSSSHDRL AQAAEDWKAG RMKLPDADDQ EFIPLPDAPL PTPAKA
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