| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4565 |
|---|
| Symbol | |
|---|
| ID | 5196590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 5023550 |
|---|
| End bp | 5024311 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640584118 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001265041 |
|---|
| Protein GI | 148557459 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.522206 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTCC TCCTCTCGCC CGCCAAATCG CTCGATTATA CGAGCCCGCT GCCCCCGCTC
GAAGCCACCG CGCCGCGCTT CGCGGAGGAG GCGCTGGCGA CCGCGCAGGC CGCCGCGAAG
CTGAGCGCCA GGAAGCTCGC CGGGCTGATG GGCATCTCGG ACAAGCTGGC GAAGCTCAAC
GCCGGCCGCT ACGCCGATTT CGCCGGCCAG GAGGAGCGGC CCGCGCTCTA CGCCTTCTCG
GGCGACGTCT ATGTCGGCTT CGAGGCGAAG ACGCTCGACG AGCCCGCGAT CGGCTTCGCG
CAGGACCATG TCCGCATCCT CTCGGGCCTT TACGGCCTGC TCCGCCCGCT CGACCTGATT
CGCCCCTATC GGCTGGAGAT GGGAACGCGC TGGGCGCCGG GCCGCAAGAA GAACCTCTAC
CAGCTCTGGG GCAGCAAGAT CTCCGACGCG CTGGCGGCCG ACCTGCTCGG CGAGGGATCG
GACGTGATCG TCAACTGCGC CAGCAAGGAA TATTGGCACG CGGTCGACCA GGCCCCGCCC
AAGGGCATCC GCATCATCAC CATGGATTTC CGCGAGCTGG CGCCGCAGGG CCTGATCTTC
AACAGCTTCG GCGCGAAGCG CGCGCGCGGC ATGATGGCGC GCTGGATGTG CGAGCATCGG
ATCACCGACC CCGAGGGGCT GAAGGGCTTC GACAGCGACG GCTATGCCTA TTCGGCCGAG
GGATCGGACG ATTCGACCTG GCGCTTCGTC AAGACCCGCT GA
|
|---|
| Protein sequence | MLLLLSPAKS LDYTSPLPPL EATAPRFAEE ALATAQAAAK LSARKLAGLM GISDKLAKLN
AGRYADFAGQ EERPALYAFS GDVYVGFEAK TLDEPAIGFA QDHVRILSGL YGLLRPLDLI
RPYRLEMGTR WAPGRKKNLY QLWGSKISDA LAADLLGEGS DVIVNCASKE YWHAVDQAPP
KGIRIITMDF RELAPQGLIF NSFGAKRARG MMARWMCEHR ITDPEGLKGF DSDGYAYSAE
GSDDSTWRFV KTR
|
|---|
| |