| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4548 |
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| Symbol | |
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| ID | 5199866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5001085 |
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| End bp | 5003340 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640584101 |
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| Product | asparagine synthase |
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| Protein accession | YP_001265024 |
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| Protein GI | 148557442 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
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| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.84734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.160196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCGCG GTCGTCGCGG CCGTCCGCAT CGGCCTCGCC CTGTTCGGCT ACCGCGTCGT
GCTCGACCAT ATCGCGAAGG CGGCGCCCGC GCGCCCGTCC GGCGCGCATG CGCATCTCCA
CATATGGTGC GTCAAGCATG GCGCGCGGAT CGTGCCGGGG GCGACCTGCC TCACCCAGGC
GCTCGCCCTC CATTATCTCC GCGCCCGCGC CGGCCATCCG ACCCGCATCC GCATCGGCGT
CCGCCGGCGC GACGACGGGC GGATCGCCGC GCATGCCTGG CTGGTCGACG GCGACGCCGT
GCTGATCGGC GGGCAGGACG AGCAGCTTTC CCGCTTCACG CCGCTCGTCG ATCTCCAGGC
CGGCCTGCGA TGAGCGGCTT CGCGGCCCTG TTCCGCCGCG ACGGCGCGCC CATGGCCGAA
GCCCTTCCCG ATCGTGCCGA GGCGGCGCTG CGCGCGCGCG GACCCTGCCA CTGGCGGCGG
GGGCGGTCCT GGGCGATGGC CGCGTCCGCG CCGCTCGCCG GCTCGGCCGA TGCGATGGCG
CTCGTCGCGG CCGACGCGCG GCTCGACAAT CGCCGCGAGC TGATCGCGGC GTTGCGGCTC
CATCCCGGCT CGTCCGACGC CGAGGTCATC CTTGCCGCCT ATCGGCGCTG GGAGGGCGAT
TGCGTCCGCA GGCTGGCCGG CGATTTCGCC TTCGTCATCC GCGACGACCG GCGCGGGGCG
ATTTTCTGCG CGCGCGACCA TTTCGGCGTC CGGCCCTTCT ATTATGCGCT CGACGACAAG
TTGTTCGCCG CCGCCGGCCT CACCCGTTTC CTGACCGCGC TTCCCGCGAT CGGCGACGCG
ATCGACGAGC AGGGCCTCGC CGATCTGCTG GCGGGCGGCT ATGCCGACGG GGCGATCACG
CGGCATCGCG GCGTCCGCCG CCTGCCGCCC GGCCACAGCC TGACGCTGAC CGAGGCAGGG
GGGCGGATCG CGCGCTACTG GCATCCGCGG GACGTGCCGG TCGAGGAGCG CGCCGACGCG
GCCGAGGGAT TTCGCGCGCT GTTCGCCGAG GCGGTCGTCC GCCGCCGCGC GCGCGGCGAC
GGCGTCGGGG TGATGCTGAG CGGCGGGCTC GATTCCTCGG CGATCGCGGT GCAGGCGACG
CAGGGCTTCG CCGCCACCGG CCGGCGGATG CCGAGCCTGT CGATGATGCT GGACGACACG
CCCGGCTGGA ACGAGCGGCC GTTCATCGAG GCGGTGCACG ACCGGGGCGG CTTCGACCCG
CGCTTCATCG ACGCCGCCGA CCATGACCCG GTCGCCGAGC TGCCCGCGCT GCTCGACGAG
CAGGAGGGCC CCTTCGTCGC CTATAATGCC AGCCTGTCGC GCCGCCTCTA CCGCCGGGCG
CGGGCGGCGG GCCTCACTCG CCTGCTCGAC GGCCATGGCG GCGACGAGGT GGTGTCGCAC
GGGCTGGGCC GCCTCAACGA GCTGGCCGCC CGAGGCGAGT GGCGTCGACT CTGGGAGGAG
AGCGCCGGCA TCGCCGGCAT CTATGGCGTC GGCCGTTGGT CGATCCTGTC GCCCTATCTG
AGCCATAACC GCTATGTCCG CCTCGCGCGC GGGCGCTGGG ATCGAATCCG AGCGCGGCTG
GGGCGGGCCG ATCCGGGCGA GATCGCCGGA GCGTCGCTGG TCGAACCCGG TCTCGCCGCG
CGCGTCGGCC TCGCCGAACG CCATGCCGAT CGCTCGATCA AGCGATCGGC GCGCCATAGC
GAGCGCGACG TCCATATCGA GCTGCTGACC GCGCCGCAGC AGGGCTATGG CTTCGAGGTG
CTCGACCGGA TGGGCGCGGC GGCCGGGGTC GCCGGCCTCT ACCCCTTCTA CGACCTGCGA
CTGGTCGAAT ATTGCCTGTC GCTGCCATCG CATCACAAGC TGAACCACGG CCTGCCCCGC
CATGTGCTGC GGCAGGCGAT GGCCGGGCTG CTGCCCGATC CGGTGCGGCT GCGACCCGAC
AAATATGATT TCGCACCCGC GCTCGCCGAT GCGCTGCTGC GCCGTCGCGT GGCCCTCGCC
GATCTGGTCG GCCGCGACCG GGCGGGGATC GGCCGCTTCG TCGACATGGA TGCGGCGCGG
ACGGCGCTCG GCCGGCTGCT CGACCGGGGC CGCGCGGTCG ATGGCGCGTC GCTGTTCGCG
GCCTGGCGGG TGCTGATGCT GGCGGTCTGG CTCGACCGCC GCGAACGGGT TTCGGGGGGC
TGGTCCGAGA TCGTCGAAAG GGAGGCCGCC GCATGA
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| Protein sequence | MPRGRRGRPH RPRPVRLPRR ARPYREGGAR APVRRACASP HMVRQAWRAD RAGGDLPHPG
ARPPLSPRPR RPSDPHPHRR PPARRRADRR ACLAGRRRRR ADRRAGRAAF PLHAARRSPG
RPAMSGFAAL FRRDGAPMAE ALPDRAEAAL RARGPCHWRR GRSWAMAASA PLAGSADAMA
LVAADARLDN RRELIAALRL HPGSSDAEVI LAAYRRWEGD CVRRLAGDFA FVIRDDRRGA
IFCARDHFGV RPFYYALDDK LFAAAGLTRF LTALPAIGDA IDEQGLADLL AGGYADGAIT
RHRGVRRLPP GHSLTLTEAG GRIARYWHPR DVPVEERADA AEGFRALFAE AVVRRRARGD
GVGVMLSGGL DSSAIAVQAT QGFAATGRRM PSLSMMLDDT PGWNERPFIE AVHDRGGFDP
RFIDAADHDP VAELPALLDE QEGPFVAYNA SLSRRLYRRA RAAGLTRLLD GHGGDEVVSH
GLGRLNELAA RGEWRRLWEE SAGIAGIYGV GRWSILSPYL SHNRYVRLAR GRWDRIRARL
GRADPGEIAG ASLVEPGLAA RVGLAERHAD RSIKRSARHS ERDVHIELLT APQQGYGFEV
LDRMGAAAGV AGLYPFYDLR LVEYCLSLPS HHKLNHGLPR HVLRQAMAGL LPDPVRLRPD
KYDFAPALAD ALLRRRVALA DLVGRDRAGI GRFVDMDAAR TALGRLLDRG RAVDGASLFA
AWRVLMLAVW LDRRERVSGG WSEIVEREAA A
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