| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4540 |
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| Symbol | |
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| ID | 5200283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4993778 |
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| End bp | 4994551 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640584093 |
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| Product | glucose-1-phosphate cytidylyltransferase |
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| Protein accession | YP_001265016 |
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| Protein GI | 148557434 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | [TIGR02623] glucose-1-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0266961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAAGA TCGCCCTGCT GGCGGGTGGC TTCGGCACGC GCCTGAGCGA GGAGACCGCG
ATCCGGCCGA AGCCGATGGT CGAGATCGGC GGTCGCCCGA TCATGTGGCA CATCATGAAG
ATCTACGCCC ATTACGGCTA TAAGGACTTC GTCGTGATCG GCGGCTACAA GGTTGAATAT
ATCCGAGATT ATTTCCTCAA CTATCGCAGC CGGGCGAGCG ACTTCACGAT CGACCTGAAA
TCGGGCGACG TCGACTGGCT GGAGGCGATC GGGGAGGACT GGCGCGTCAC CATCGTCGAC
ACCGGTCACG ACACGCTGAC CGGCGGGCGG CTGCTGCGGG CGCGGCATCT GCTCGACGGC
GGGCGCTTCG GCCTGACCTA TGGCGACGGC GTCAGCGACG TCGACATCCC GGCGGTGATC
GCGGCGCACG AGGCGGCGGG CGCCTGGTGC ACCCTGACCG CCGTGACGCA GCCCGGCCGC
TATGGCTCGC TCCGGATCGA CGAGGACGGC CACCGGGTCC AGGGCTTCCG CGAGAAGGGG
GCGGCCGACG GCGGCCTGAT CAATGGCGGC TTCTTCGTCT GCGAGCCCGA ACTGCTCGAC
CTGATCGACG GCGACCAGAC CACCTTCGAG GCCGAGCCGA TGGACCGGCT GATCGAGCGC
GGCAAGCTCG CCAGCTACCA TCATGACGGC TTCTGGCAGA GCATGGATTC ACTGCGCGAC
AAGCATCTGC TCGAGGAATT GTGGGCCAAC GGCGCCCCCT GGAAGGTCTG GTAG
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| Protein sequence | MRKIALLAGG FGTRLSEETA IRPKPMVEIG GRPIMWHIMK IYAHYGYKDF VVIGGYKVEY
IRDYFLNYRS RASDFTIDLK SGDVDWLEAI GEDWRVTIVD TGHDTLTGGR LLRARHLLDG
GRFGLTYGDG VSDVDIPAVI AAHEAAGAWC TLTAVTQPGR YGSLRIDEDG HRVQGFREKG
AADGGLINGG FFVCEPELLD LIDGDQTTFE AEPMDRLIER GKLASYHHDG FWQSMDSLRD
KHLLEELWAN GAPWKVW
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