| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4512 |
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| Symbol | |
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| ID | 5200177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4957761 |
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| End bp | 4959332 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640584065 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001264988 |
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| Protein GI | 148557406 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.215591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.994671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGG CCGCCGCTGA CGGCCATATG GCGCCGGCGG TGGAGACGCC GGTCGGGCGC
GCGGACGCCA GCGCCTGGCT GGCGGTGATC GCCGGCAGCC TCGGTGCGAT GATGGCGACG
CTCGACGTCT CGATCGTCAA CTCGTCGCTG CCCACCATCC AGGGCGAGAT CGGCGCCAGC
GGCACCGAAG GCACCTGGAT CGCGACCGCC TATCTGGTCG CGGAAATCGT CATCATCCCG
CTGTCGGCCT GGCTCGAGCG CGTGCTCGGC CTGCGGACAC TGCTGATCGT CGCGGCGGCG
CTGTTCACCG GCTTCTCGAT GATGTGCGGC TTCTCGACCA ACCTGACCAT GATGATCATC
GGCCGGGTGG GGCAGGGCTT CACCGGCGGC GCGCTGATCC CGACCGCGAT GACGATCATC
GCCACCCGCC TGCCGCGCGA GCAGCAGCCG GTCGGCAACG CCTTGTTCGG GGTGACCGCG
ATCCTCGGGC CGGTGCTGGG GCCGCTGATC GGCGGCTGGC TGACCGAGAA CATCAGCTGG
CACTATGCCT TCTTCCTCAA CCTGCCGATC GGCATCCTGC TGATCTCGCT GCTGCTGCTG
ACCATGCCGC ACCACAAGGC GCGGCTGGGC GAGCTGCTCC AGGCCGACTG GCTCGGCATC
GCCGGACTGA TGTTCGGACT CGGCGGCCTG ACCGTGGTGC TCGAGGAAGG CCAGCGCGAG
CAATGGTTCC AGAGCGACGT GATCGTGAAG GTCTCGATCG TCGCCGCCCT CGGCTTCATC
TCGCTGTTCG CGGGGCAGTT CCTCGCGCGC CGTCCGGTGA TCAAGCTCAA GCTGCTGCTC
GACCGGCAGT TCGGCGCGGT CGCGGTGATG GCGATCGTGA TCGGCATGAT GCTCTACGGC
ACCTCCTATG TGATCCCGCA ATTCCTGGCC GCGATCGCCG GCTACAACGC GCTGCAATCG
GGCAAGATCG TGCTGATCTC GGGGATTCCC AGCCTGTTGC TGATGCCCTT CACGCCGCTG
CTGATCCGCT ATGTCGACAT CCGCATCGCG GTCGGCATCG GCCTGGCGAT CATGGCGACG
AGCTGCGGCA TCGACACCGC GCTCAGCGCC CAGTCGGACG GCGGCTCCTT CGTCGACAGC
CAGCTCCTGC GCGGCGTCGG CACGATCATG GCCTTCCTGT TCCTCAACCA GGCGGCGATC
GCCTCGGTGA GCGCCAGGGA CGTGGGCGAT GCCGCCGGCC TGTTCAGCGC GATGCGCAAC
CTCGGCGGAT CGTTCGCGCT TGCCGGCATC GCCATCGTCC AGGACCAGCG CCAATGGCTC
CACAACCGTC GGATCGAGGA ATCGCTCAAC GCCAATTCGG TCGGCCTGCA GGATTATCTG
GCGGGCCTGA CCCATGCGCT CGGCAATGCC GATGCGGCGC TGCGCACCCT GGCGGGCACG
ATCCAGCGCG ATGCGCTGGT GATGACCTTC AACGATATCT TCTGGCTGAT GACGGTCGGC
ATCGTCTGCG TGATGCCGCT CGTCCTGTTC CTTCGCCCGC TGCCCAAGGG GCAGGCGATC
GCGATGCATT GA
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| Protein sequence | MSAAAADGHM APAVETPVGR ADASAWLAVI AGSLGAMMAT LDVSIVNSSL PTIQGEIGAS
GTEGTWIATA YLVAEIVIIP LSAWLERVLG LRTLLIVAAA LFTGFSMMCG FSTNLTMMII
GRVGQGFTGG ALIPTAMTII ATRLPREQQP VGNALFGVTA ILGPVLGPLI GGWLTENISW
HYAFFLNLPI GILLISLLLL TMPHHKARLG ELLQADWLGI AGLMFGLGGL TVVLEEGQRE
QWFQSDVIVK VSIVAALGFI SLFAGQFLAR RPVIKLKLLL DRQFGAVAVM AIVIGMMLYG
TSYVIPQFLA AIAGYNALQS GKIVLISGIP SLLLMPFTPL LIRYVDIRIA VGIGLAIMAT
SCGIDTALSA QSDGGSFVDS QLLRGVGTIM AFLFLNQAAI ASVSARDVGD AAGLFSAMRN
LGGSFALAGI AIVQDQRQWL HNRRIEESLN ANSVGLQDYL AGLTHALGNA DAALRTLAGT
IQRDALVMTF NDIFWLMTVG IVCVMPLVLF LRPLPKGQAI AMH
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