Gene Swit_4506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4506 
Symbol 
ID5196641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4950495 
End bp4951427 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content72% 
IMG OID640584059 
Producthypothetical protein 
Protein accessionYP_001264982 
Protein GI148557400 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0632978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.161392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAG GCGCGGATTC CCGCAATGTC GGCGAGCAGC TCGCCGCTGA ACGCGCTCGG 
CAGAAGCTGG ACCTGAGCGA CGTCGCCGCG CGTACCCGCA TCCCGCTCCG CCATCTCGAC
GCGATCGAGA AGGGCGAGCA TGGCAACCTG CCGGCGCTGC CCTATTCGAC CGGCTTCGTG
AAGAGCTACG CCAACATGCT GGGCCTCGAC GGCCAGGCCT TGTCGCGCGC CTTCCGCGAC
CAGATCGGGG GCGAGCAGCG GGCCCATTTC GAGCCCGAGG CCTATGAGCC GGTCGATCCG
ACCCGGGTGC CGTCGCGGCT GCTGGCGATG ATCGCGCTCG GCGTCGCGCT GCTGCTCGGC
ATGGGGTATC TGCTGCTCCG CTTCGAAGGC GACAGCAGCG ACCTCGCCAA GCTCGCCGCC
GACACGGTGC AGGACATCCG CCCGGTCCCG GCCCGCCGCC CGCCGCCGCC GGCCGCCGTT
CCGGCGCAGC CCGCCGTCCC GACCGGCCCG ATCAGCGTCG CCGCCAGCGA GGACGTCTGG
ATCAAGCTGT CCGAACGCGA AGGCGCCAGG ACCTATTTCA TGAACGTGCT GGCGGCCGGG
CAGAGCTTCA CCCTGCCTGA CGACGCGGTC GATCCGATCC TGCGCACCGG CCGGCCGCAG
TCGCTCAAGG TGCTGATCGG TACGACCGAG CTGCCGCCGG TGGGCGAGCC GGACCGCCTC
GTCCGCGCCT ACAGCCTCAA GCGCGACGCG CTCGTCGCGA TCGCCACCGC GAAGCCCGAC
GCCGCCATGC CGGCGGACGG CGCGGCCAAT GCCAGCGATG CGGGCGCCGT CCCGGATGCT
TTCCGCAGCG TTCCGCCGAT CTACGACCCG GCGGCGGGCC GCGCGGACAC GGCTGGACCG
GCCAGTGACT CGGATCGCCG CCCGCGGCCT TGA
 
Protein sequence
MSEGADSRNV GEQLAAERAR QKLDLSDVAA RTRIPLRHLD AIEKGEHGNL PALPYSTGFV 
KSYANMLGLD GQALSRAFRD QIGGEQRAHF EPEAYEPVDP TRVPSRLLAM IALGVALLLG
MGYLLLRFEG DSSDLAKLAA DTVQDIRPVP ARRPPPPAAV PAQPAVPTGP ISVAASEDVW
IKLSEREGAR TYFMNVLAAG QSFTLPDDAV DPILRTGRPQ SLKVLIGTTE LPPVGEPDRL
VRAYSLKRDA LVAIATAKPD AAMPADGAAN ASDAGAVPDA FRSVPPIYDP AAGRADTAGP
ASDSDRRPRP