| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4505 |
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| Symbol | |
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| ID | 5196640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4948101 |
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| End bp | 4950380 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640584058 |
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| Product | phosphoenolpyruvate-protein phosphotransferase PtsP |
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| Protein accession | YP_001264981 |
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| Protein GI | 148557399 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
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| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0585827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0585492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACCGC TGACAGCAAC CTCCGCCGCG CGTGAGATAT TGACGCGCCT GCATGACGTC
ATGGCGTCAC GCTCGGCTGC GCAGACCAAG CTCAACCAGG TCGTCCAGAT CATCGGCGAG
GCGCTCGATA CCGAGGTCTG CTCGGTCTAC CTGCTGCGCG ACGGCGCGCT GGAGCTGTTC
GCCACCCGCG GCCTGAAGCA GGGCGCCGTC CACGTCACCA AGCTGGCGCT CGGCGAGGGC
CTGGTCGGGA CGATCGCGCA GAATGTCGAG ACGCTCAACC TCGACGAGGC GACCAGCCAC
CCTGATTTCG CCTACAAGCC CGAGACCGGC GAGGAGCTGT TCCACAGCTT CGCGGGCGTG
CCGATCGTCC GGCGGGAGCG TGCGGTCGGC GTGCTCGCCG TCCAGCATCG CGACCAGCGC
CGGTTCGACG ATGTCGAGAT CGAGGCGCTG CAGACCGTCG CGATGGTGCT GGCCGAGCTG
ATCGCCGGCG CCGGCCTGAT CGACGAGGGC GTCCCCGGTT CGAAGGGCAC GCGCGACAAT
GGGGCGGTGC GCCTCGCCGG CCTCAAGCTG GTCGAGGGGA TGGCGCGGGG CAGGGCGGTC
TATCACCAGC CGCGCATCGA GATCGAGCAT ACCGTCGCCG AGGATATCGA GGTCGAGCGC
CACCGCGTCA TCTCCGCCTT CTCGAAGATG CGCGACCAGA TCGAGCGGAT GACCCGCGAG
GCCGATTTCG GCGCGGGCGG CGAGCATCAG GACGTCCTCG CGATGTACAA GATGTTCGCC
TATGACGAGG GCTGGATCCG GCGGATCAAC GAGGCGATCG ACAGCGGCCT GACCGCCGAG
GCGGCGATCG AGCGCGTCCA GCAGCGCACC CGCATGCGGA TGCGCGAGAT CGGCGATCCG
CTGCTCGCCG ACCGGATGCA CGACCTGGAG GACCTCTCCA ACCGCCTGCT CCGCATCGTC
TCCGGCCAGC TCGGCACGGC GGCGCAGCTC GGCCTGCGCC ATGATTCGAT CCTGATCGCG
CGCAACCTCG GCCCCGCCGA GCTGCTCGAA TATGATCGTC GCCGGCTCAA GGGCGTGGTG
CTCGAGGAAG GCTCGCTCAC CGCTCATGTC ACGATCGTCG CGCGGGCGAT GGGCGTGCCG
GTGCTGGGCC GGGTCAAGGA TGTCCGCCGG ATGATCGGCG AAGGCGACAC GCTGCTGCTC
GACGGCACTG CCGGCTCGGT CGTCGTCCGC GCCAATGCGA CCATGGAGGA GGCCTTCGAG
GCCAAGATGA TGGTCGGGCA GAAGCGTCGC GCCGAATTCG CGGCGATGCG CGACCTGCCC
GCCCGGACCC GCGACGACCT GCGCATCGAG CTGATGGTCA ATGCCGGCCT GCGCGACGAC
ATGGCCGCGC TCGACGTCAC CGGCGCCGAC GGCATCGGCC TGTTCCGCAC CGAATTCCAG
TTCCTCGTCT CCGCCACGCT GCCGCAGCGC GAGCGCCAGC TCCGCCTCTA TCGCGACGTT
CTGGATGCCG CGGGCGACCG GCCGGTGATC TTCCGCACGG TCGACATCGG CGGCGACAAG
GCCCTGCCCT ATCTCAAGGC GGGCGACGAT GCGGACGAGG AGAATCCCGC CCTCGGCTGG
CGCGCCATCC GTCTCGGCCT CGAACGCGAC GCGCTGATGA AGGTCCAGGC GCGCGCGCTG
ATCGAGGCGG CGGCGGGCCG GACCCTCAAC GTCATGTTCC CGATGGTGTC GGAACCGTGG
GAGTTCGAGG AGGCCGTCGC GCTGTTCGAT GCGCAGCGCA AATGGATCCA CGATCATGGC
CGGGGCGTCC CCAATGCGAT CCGCTACGGC ACGATGCTCG AGGTGCCGGC GCTCGCCGAG
AGCCTCGACA TGCTGCTGCC CAGGCTGGAT TTCCTGTCGA TCGGCACCAA CGACCTGACC
CAGTTCCTGT TCGCCGCCGA CCGCGCCAAT CCCAAGCTGG CCGAGCGGTA CGACTGGCTG
AGCCCCGCGA TCCTGCGCTT CATCGGCCGG GTGACGCGGC AGACGCGCGC GGCGGGCGTG
CCGATCGGCG TGTGCGGTGA GATGGGTGGT CGTCCGTTGG AAGCGATGGC GCTGATCGGC
CTCGGGATCG ATCGCCTCTC GATCACGCCG GCGGCGGTCG GGCCGGTCAA GGCGATGATC
CGTTCGCTCG ACGCGAAGGC GCTGCGCGAA GCGATGGACG GCTTCCTCGG CCGGCCGCTC
CGCACCCTGC GCGGCGATCT GGCCGCCTGG GCGGAGAGCA ATGGGGTTGC GGTCGCCTGA
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| Protein sequence | MAPLTATSAA REILTRLHDV MASRSAAQTK LNQVVQIIGE ALDTEVCSVY LLRDGALELF
ATRGLKQGAV HVTKLALGEG LVGTIAQNVE TLNLDEATSH PDFAYKPETG EELFHSFAGV
PIVRRERAVG VLAVQHRDQR RFDDVEIEAL QTVAMVLAEL IAGAGLIDEG VPGSKGTRDN
GAVRLAGLKL VEGMARGRAV YHQPRIEIEH TVAEDIEVER HRVISAFSKM RDQIERMTRE
ADFGAGGEHQ DVLAMYKMFA YDEGWIRRIN EAIDSGLTAE AAIERVQQRT RMRMREIGDP
LLADRMHDLE DLSNRLLRIV SGQLGTAAQL GLRHDSILIA RNLGPAELLE YDRRRLKGVV
LEEGSLTAHV TIVARAMGVP VLGRVKDVRR MIGEGDTLLL DGTAGSVVVR ANATMEEAFE
AKMMVGQKRR AEFAAMRDLP ARTRDDLRIE LMVNAGLRDD MAALDVTGAD GIGLFRTEFQ
FLVSATLPQR ERQLRLYRDV LDAAGDRPVI FRTVDIGGDK ALPYLKAGDD ADEENPALGW
RAIRLGLERD ALMKVQARAL IEAAAGRTLN VMFPMVSEPW EFEEAVALFD AQRKWIHDHG
RGVPNAIRYG TMLEVPALAE SLDMLLPRLD FLSIGTNDLT QFLFAADRAN PKLAERYDWL
SPAILRFIGR VTRQTRAAGV PIGVCGEMGG RPLEAMALIG LGIDRLSITP AAVGPVKAMI
RSLDAKALRE AMDGFLGRPL RTLRGDLAAW AESNGVAVA
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