Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4504 |
Symbol | |
ID | 5196639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4946986 |
End bp | 4948002 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640584057 |
Product | 2-nitropropane dioxygenase, NPD |
Protein accession | YP_001264980 |
Protein GI | 148557398 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.372283 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.089603 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGGCG GTGCCCGACT CGCCGCCCTG ATGGAGCGCG GCGCGGCCCT GCTGGGCAGC GACTATGCGA TCCTCGGCGG GGCGATGAGC TGGGTTTCCG AACGGAACCT CGTCGCCGCC ATGTCGAATG CCGGCTGCTT CGGCGTGATC GCGTGCGGCG CGATGACGCC CGAGCTGCTC GATGCCGAGA TCGCGGGCAC CAGGGCGCTG ACCGCGAAGC CGTTCGGCGT CAACCTGATC ACCATGCACC CGCAGCTCAC CGACCTGATC GAGGTCTGCG CGAAGCATGG CGTCGGTCAT GTCGTGCTGG CCGGCGGCCT GCCGCCGGGC GGCGCGATCG AGCGGATCAA GGCCTCGGGC GCGAAGGTCA TCTGCTTCGC CCCGGCGCTC GCGCTGGCGA AGAAGCTGAT CCGCTCGGGC ATCGACGCGC TGGTGATCGA GGGCATGGAG GCCGGCGGCC ATATCGGCCC GGTCTCGACC TCGGTGCTGG CGCAGGAGAT ATTGCCGGTC GTCGCCGGCG AGCTGCCGGT GTTCGTCGCC GGCGGGATCG GCCGGGGCGA AGCGATCGCC GGCTATCTCG AAATGGGCGC TGCGGGCGTC CAGCTCGGCA CCCGCTTCGT TTGTGCCGCC GAATCGATCG CGCATCCGAA CTTCAAGAGG GCGTTCATCC GCGCCTCGGC GCGTGATGCG ATCACCAGCG TCCAGATCGA CCCGCGCCTG CCGGTCATCC CGGTCCGCGC ACTGCGCAAC GCCTCGTCCG AGCTGTTCAC CGCCAAGCAG CGCGAGGTCG CCCAGCTCCT CGACGACGGC AAGGTCGAGA TGGCCGAGGC CCAGCTCCAG ATCGAGCATT ACTGGGCCGG CGCACTCCGC CGCGCGGTGA TCGACGGCGA TGTCGAGCAT GGCTCGGTGA TGGCGGGCCA GTCGGTCGGC ATGGTCACGA AGGAAGAGCC GCTCGCCGAC ATCGTCGCGA CCCTGATCGG CGAGGCGTCG GCGGCGCTGG AGCAGCGCGC GGCCTGA
|
Protein sequence | MSGGARLAAL MERGAALLGS DYAILGGAMS WVSERNLVAA MSNAGCFGVI ACGAMTPELL DAEIAGTRAL TAKPFGVNLI TMHPQLTDLI EVCAKHGVGH VVLAGGLPPG GAIERIKASG AKVICFAPAL ALAKKLIRSG IDALVIEGME AGGHIGPVST SVLAQEILPV VAGELPVFVA GGIGRGEAIA GYLEMGAAGV QLGTRFVCAA ESIAHPNFKR AFIRASARDA ITSVQIDPRL PVIPVRALRN ASSELFTAKQ REVAQLLDDG KVEMAEAQLQ IEHYWAGALR RAVIDGDVEH GSVMAGQSVG MVTKEEPLAD IVATLIGEAS AALEQRAA
|
| |